The 2.0 version of rSNPBase

Variant report

Variant rs73505471
Chromosome Location chr11:34177547-34177548
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:110 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:34128800-34178000 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
2 chr11:34129000-34177800 Strong transcription HUES48 Cell Line embryonic stem cell
3 chr11:34129200-34177800 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
4 chr11:34129600-34178200 Strong transcription Liver Liver
5 chr11:34130000-34181800 Strong transcription A549 lung
6 chr11:34130200-34177600 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
7 chr11:34138800-34185600 Strong transcription Fetal Brain Female brain
8 chr11:34146200-34187600 Strong transcription Cortex derived primary cultured neurospheres brain
9 chr11:34150600-34178000 Strong transcription Breast Myoepithelial Primary Cells Breast
10 chr11:34152200-34177600 Strong transcription NHEK skin
11 chr11:34152200-34184800 Strong transcription Brain Germinal Matrix brain
12 chr11:34152400-34186600 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
13 chr11:34155800-34177800 Strong transcription Right Ventricle heart
14 chr11:34165800-34184600 Weak transcription Stomach Mucosa stomach
15 chr11:34166800-34182400 Weak transcription Psoas Muscle Psoas
16 chr11:34169600-34196200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
17 chr11:34170200-34178600 Weak transcription Small Intestine intestine
18 chr11:34170200-34183400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
19 chr11:34170400-34177600 Strong transcription HUES6 Cell Line embryonic stem cell
20 chr11:34170800-34182000 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
21 chr11:34171400-34180000 Weak transcription Primary T killer naive cells fromperipheralblood blood
22 chr11:34171400-34180800 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
23 chr11:34172200-34178800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
24 chr11:34172400-34185200 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
25 chr11:34172600-34180000 Weak transcription Primary T cells fromperipheralblood blood
26 chr11:34172600-34190400 Strong transcription Fetal Intestine Small intestine
27 chr11:34172800-34179000 Weak transcription NH-A brain
28 chr11:34172800-34180200 Weak transcription Primary T helper cells fromperipheralblood blood
29 chr11:34173000-34178000 Weak transcription Hela-S3 cervix
30 chr11:34173000-34182400 Strong transcription Fetal Muscle Leg muscle
31 chr11:34173000-34182400 Strong transcription Placenta Placenta
32 chr11:34173000-34183600 Strong transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
33 chr11:34173200-34179200 Strong transcription Fetal Adrenal Gland Adrenal Gland
34 chr11:34173200-34180000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
35 chr11:34173200-34195600 Weak transcription iPS-20b Cell Line embryonic stem cell
36 chr11:34173400-34189400 Strong transcription HSMMtube muscle
37 chr11:34173600-34177600 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
38 chr11:34173600-34177600 Strong transcription NHLF lung
39 chr11:34173600-34178000 Weak transcription Primary T regulatory cells fromperipheralblood blood
40 chr11:34173800-34180400 Weak transcription Primary T helper naive cells fromperipheralblood blood
41 chr11:34173800-34185000 Strong transcription Duodenum Mucosa Duodenum
42 chr11:34174400-34184000 Weak transcription Fetal Intestine Large intestine
43 chr11:34174400-34190800 Weak transcription Colonic Mucosa Colon
44 chr11:34174600-34177600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
45 chr11:34174600-34193400 Weak transcription Rectal Mucosa Donor 29 rectum
46 chr11:34175200-34178800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
47 chr11:34175400-34187400 Weak transcription HMEC breast
48 chr11:34175600-34177600 Genic enhancers Foreskin Fibroblast Primary Cells skin01 Skin
49 chr11:34175600-34178000 Genic enhancers Foreskin Melanocyte Primary Cells skin01 Skin
50 chr11:34175800-34177800 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin

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Last update: Aug 31, 2015