Variant report

Variant	rs73508280
Chromosome Location	chr11:83646739-83646740
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 19 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:18)

rs_ID	r²[population]
rs59236932	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs59582831	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs61256660	0.83[AFR][1000 genomes]
rs73508261	0.80[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73508263	1.00[AFR][1000 genomes]
rs73508265	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73508269	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73508270	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73508279	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73508281	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73508283	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73508286	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73508289	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73508292	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73508293	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73508294	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73509808	0.83[AFR][1000 genomes]
rs790367	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv555608	chr11:83633189-83651102	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Strong transcription	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:83629800-83661800	Weak transcription	Brain Cingulate Gyrus	brain
2	chr11:83634600-83649400	Weak transcription	Brain Inferior Temporal Lobe	brain
3	chr11:83639400-83649600	Weak transcription	Brain Hippocampus Middle	brain
4	chr11:83639600-83659400	Weak transcription	Ovary	ovary

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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