The 2.0 version of rSNPBase

Variant report

Variant rs73528786
Chromosome Location chr6:118952585-118952586
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:88 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:118912200-118966200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
2 chr6:118927000-118965000 Weak transcription NHLF lung
3 chr6:118931600-118970400 Weak transcription NH-A brain
4 chr6:118940200-118966400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
5 chr6:118940400-118960600 Weak transcription Colon Smooth Muscle Colon
6 chr6:118940600-118955200 Weak transcription Brain Substantia Nigra brain
7 chr6:118940800-118953400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
8 chr6:118940800-118954800 Weak transcription Lung lung
9 chr6:118940800-118955000 Weak transcription Brain Hippocampus Middle brain
10 chr6:118940800-118960200 Weak transcription Brain Inferior Temporal Lobe brain
11 chr6:118942600-118957600 Weak transcription Pancreas Pancrea
12 chr6:118943800-118954800 Weak transcription Muscle Satellite Cultured Cells --
13 chr6:118943800-118970000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
14 chr6:118944400-118961600 Weak transcription Ovary ovary
15 chr6:118945800-118955800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
16 chr6:118946200-118955000 Weak transcription Skeletal Muscle Male skeletal muscle
17 chr6:118947200-118953800 Strong transcription Primary B cells from cord blood blood
18 chr6:118947600-118953800 Strong transcription Primary T cells from cord blood blood
19 chr6:118948000-118952600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
20 chr6:118948000-118952800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
21 chr6:118948000-118954000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
22 chr6:118948000-118954200 Strong transcription Fetal Thymus thymus
23 chr6:118948200-118956200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
24 chr6:118948600-118954200 Strong transcription Primary hematopoietic stem cells short term culture blood
25 chr6:118948800-118959600 Weak transcription Brain Anterior Caudate brain
26 chr6:118948800-118959600 Weak transcription Rectal Smooth Muscle rectum
27 chr6:118949000-118955400 Weak transcription Fetal Intestine Large intestine
28 chr6:118949000-118959200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
29 chr6:118949200-118958600 Weak transcription Primary T killer memory cells from peripheral blood blood
30 chr6:118949200-118960200 Weak transcription Brain Cingulate Gyrus brain
31 chr6:118949400-118955200 Weak transcription Brain Germinal Matrix brain
32 chr6:118949400-118960200 Weak transcription GM12878-XiMat blood
33 chr6:118949600-118959400 Weak transcription Duodenum Smooth Muscle Duodenum
34 chr6:118950200-118954200 Strong transcription Dnd41 blood
35 chr6:118950400-118952800 Strong transcription Breast Myoepithelial Primary Cells Breast
36 chr6:118950400-118953200 Strong transcription Fetal Lung lung
37 chr6:118950400-118953800 Strong transcription Monocytes-CD14+_RO01746 blood
38 chr6:118950400-118970400 Weak transcription Fetal Kidney kidney
39 chr6:118950600-118952800 Strong transcription Primary monocytes fromperipheralblood blood
40 chr6:118950600-118953800 Strong transcription Fetal Muscle Leg muscle
41 chr6:118951000-118952600 Genic enhancers Primary T helper naive cells from peripheral blood blood
42 chr6:118951000-118952600 Strong transcription Cortex derived primary cultured neurospheres brain
43 chr6:118951000-118952600 Strong transcription Fetal Muscle Trunk muscle
44 chr6:118951000-118953000 Strong transcription Primary T regulatory cells fromperipheralblood blood
45 chr6:118951200-118953000 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
46 chr6:118951200-118953200 Strong transcription Primary Natural Killer cells fromperipheralblood blood
47 chr6:118951200-118953200 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
48 chr6:118951400-118953000 Enhancers Primary T helper memory cells from peripheral blood 2 blood
49 chr6:118951400-118960400 Weak transcription Brain Angular Gyrus brain
50 chr6:118951600-118953200 Strong transcription Primary B cells from peripheral blood blood

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Last update: Aug 31, 2015