Variant report

Variant	rs73531318
Chromosome Location	chr6:109713016-109713017
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr6:109701817..109708859-chr6:109709273..109715844,12	K562	blood:
2	chr6:109711182..109714084-chr6:109716397..109718567,2	K562	blood:
3	chr6:109711604..109714204-chr6:109721732..109723355,2	K562	blood:

Variant related genes	Relation type
ENSG00000135535	Chromatin interaction
ENSG00000260273	Chromatin interaction

rs_ID	r²[population]
rs60427761	1.00[AFR][1000 genomes]
rs61253616	0.81[AFR][1000 genomes]
rs73526147	1.00[AFR][1000 genomes]
rs73527213	1.00[AFR][1000 genomes]
rs73527238	1.00[AFR][1000 genomes]

Chromatin state (count:34 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:109705000-109745200	Weak transcription	Fetal Kidney	kidney
2	chr6:109706200-109717200	Weak transcription	Brain Angular Gyrus	brain
3	chr6:109706200-109717800	Weak transcription	Thymus	Thymus
4	chr6:109706400-109715000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
5	chr6:109706400-109718400	Weak transcription	Primary B cells from cord blood	blood
6	chr6:109706600-109714800	Weak transcription	Brain Hippocampus Middle	brain
7	chr6:109706600-109717400	Weak transcription	Primary hematopoietic stem cells	blood
8	chr6:109706600-109735800	Weak transcription	Breast Myoepithelial Primary Cells	Breast
9	chr6:109706800-109715600	Weak transcription	Gastric	stomach
10	chr6:109706800-109718600	Weak transcription	Rectal Mucosa Donor 31	rectum
11	chr6:109707000-109755400	Weak transcription	Fetal Intestine Small	intestine
12	chr6:109709800-109714800	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
13	chr6:109710200-109713400	Enhancers	Fetal Intestine Large	intestine
14	chr6:109710200-109714800	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
15	chr6:109710800-109713200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
16	chr6:109711000-109713600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
17	chr6:109711400-109713400	Enhancers	Fetal Adrenal Gland	Adrenal Gland
18	chr6:109711400-109714800	Weak transcription	Brain Substantia Nigra	brain
19	chr6:109711400-109714800	Weak transcription	HMEC	breast
20	chr6:109711800-109725000	Weak transcription	Brain Anterior Caudate	brain
21	chr6:109712000-109713200	Enhancers	Hela-S3	cervix
22	chr6:109712000-109713200	Weak transcription	Osteobl	bone
23	chr6:109712000-109714800	Weak transcription	Stomach Mucosa	stomach
24	chr6:109712600-109713400	Enhancers	K562	blood
25	chr6:109712800-109713400	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
26	chr6:109712800-109714800	Weak transcription	Primary hematopoietic stem cells short term culture	blood
27	chr6:109712800-109715400	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
28	chr6:109712800-109716400	Weak transcription	Primary neutrophils fromperipheralblood	blood
29	chr6:109712800-109736200	Weak transcription	Left Ventricle	heart
30	chr6:109713000-109714200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
31	chr6:109713000-109714800	Weak transcription	Primary monocytes fromperipheralblood	blood
32	chr6:109713000-109714800	Weak transcription	Monocytes-CD14+_RO01746	blood
33	chr6:109713000-109715000	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
34	chr6:109713000-109715000	Weak transcription	NHEK	skin

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