Variant report

Variant	rs73553007
Chromosome Location	chr6:133933171-133933172
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 5 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:3)

rs_ID	r²[population]
rs73553037	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73563336	1.00[AMR][1000 genomes]
rs73563351	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv886682	chr6:133892208-133943732	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
2	nsv1019267	chr6:133912335-133975187	Flanking Active TSS ZNF genes & repeats Enhancers Weak transcription Transcr. at gene 5' and 3' Active TSS Bivalent Enhancer	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:11 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:133929000-133935600	Enhancers	Hela-S3	cervix
2	chr6:133931200-133934000	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
3	chr6:133931200-133934200	Weak transcription	Fetal Kidney	kidney
4	chr6:133931400-133934800	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
5	chr6:133931600-133934200	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
6	chr6:133932200-133934400	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
7	chr6:133932200-133944200	Weak transcription	NH-A	brain
8	chr6:133932600-133934000	Weak transcription	Fetal Lung	lung
9	chr6:133932800-133934000	ZNF genes & repeats	A549	lung
10	chr6:133933000-133935000	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
11	chr6:133933000-133935400	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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