Variant report

Variant	rs7355379
Chromosome Location	chr2:30918288-30918289
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 6 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:5)

rs_ID	r²[population]
rs10211502	1.00[EUR][1000 genomes]
rs13416208	1.00[EUR][1000 genomes]
rs13418291	0.90[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs13423931	1.00[YRI][hapmap];0.90[AFR][1000 genomes]
rs72867118	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv533886	chr2:30130019-31068764	ZNF genes & repeats Enhancers Genic enhancers Weak transcription Flanking Active TSS Active TSS Strong transcription Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	32 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:11 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:30902400-30954000	Weak transcription	Gastric	stomach
2	chr2:30915200-30918400	Enhancers	Skeletal Muscle Male	skeletal muscle
3	chr2:30915600-30918400	Enhancers	NHDF-Ad	bronchial
4	chr2:30916600-30918400	Enhancers	Left Ventricle	heart
5	chr2:30916800-30918400	Enhancers	Aorta	Aorta
6	chr2:30916800-30918600	Enhancers	Skeletal Muscle Female	skeletal muscle
7	chr2:30917000-30918400	Enhancers	Psoas Muscle	Psoas
8	chr2:30917200-30918400	Enhancers	Breast Myoepithelial Primary Cells	Breast
9	chr2:30917200-30918600	Enhancers	Fetal Heart	heart
10	chr2:30917400-30920200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
11	chr2:30918000-30918400	Enhancers	Fetal Lung	lung

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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