Variant report

Variant	rs73577499
Chromosome Location	chr8:49837259-49837260
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr8:49837099..49839896-chr8:49842697..49845711,3	K562	blood:
2	chr8:49831508..49833855-chr8:49836023..49837709,2	K562	blood:

Extended variants
information (count: 10 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:9)

rs_ID	r²[population]
rs57490347	0.93[AFR][1000 genomes]
rs73579305	1.00[AFR][1000 genomes]
rs73579310	1.00[AFR][1000 genomes]
rs73579311	1.00[AFR][1000 genomes]
rs73579315	0.93[AFR][1000 genomes]
rs73579320	0.93[AFR][1000 genomes]
rs73579322	0.93[AFR][1000 genomes]
rs73579324	0.93[AFR][1000 genomes]
rs73579326	0.93[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv890854	chr8:49738821-49838908	Active TSS Enhancers Transcr. at gene 5' and 3' Weak transcription Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Flanking Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:35 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:49835000-49838000	Enhancers	Fetal Muscle Leg	muscle
2	chr8:49835000-49838200	Enhancers	Fetal Stomach	stomach
3	chr8:49835000-49840200	Enhancers	Placenta Amnion	Placenta Amnion
4	chr8:49835200-49838200	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
5	chr8:49835400-49838000	Enhancers	Breast Myoepithelial Primary Cells	Breast
6	chr8:49835400-49838000	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
7	chr8:49835600-49837600	Weak transcription	NHLF	lung
8	chr8:49835600-49838000	Weak transcription	Fetal Kidney	kidney
9	chr8:49835800-49837800	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
10	chr8:49835800-49837800	Weak transcription	Osteobl	bone
11	chr8:49835800-49838800	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
12	chr8:49835800-49838800	Enhancers	HMEC	breast
13	chr8:49835800-49839000	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
14	chr8:49836000-49837400	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
15	chr8:49836000-49837800	Weak transcription	NH-A	brain
16	chr8:49836000-49838800	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
17	chr8:49836200-49837800	Enhancers	Foreskin Melanocyte Primary Cells skin01	Skin
18	chr8:49836200-49838200	Enhancers	Muscle Satellite Cultured Cells	--
19	chr8:49836200-49838200	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
20	chr8:49836200-49839200	Enhancers	Fetal Lung	lung
21	chr8:49836400-49837600	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
22	chr8:49836400-49837600	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
23	chr8:49836400-49837600	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
24	chr8:49836400-49837600	Weak transcription	Fetal Brain Male	brain
25	chr8:49836400-49837800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
26	chr8:49836400-49838800	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
27	chr8:49836600-49837600	Weak transcription	NHDF-Ad	bronchial
28	chr8:49836600-49838800	Enhancers	Hela-S3	cervix
29	chr8:49836800-49838200	Enhancers	HSMMtube	muscle
30	chr8:49836800-49838800	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
31	chr8:49836800-49838800	Enhancers	NHEK	skin
32	chr8:49836800-49839000	Enhancers	Dnd41	blood
33	chr8:49836800-49843200	Weak transcription	Esophagus	oesophagus
34	chr8:49837000-49837400	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
35	chr8:49837000-49838200	Enhancers	HSMM	muscle

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