Variant report

Variant	rs73583401
Chromosome Location	chr8:51711798-51711799
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr8:51711545..51713227-chr8:51715658..51718026,2	K562	blood:

Extended variants
information (count: 30 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs57516027	1.00[AMR][1000 genomes]
rs57894733	1.00[AMR][1000 genomes]
rs61647165	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73569458	1.00[AMR][1000 genomes]
rs73569463	1.00[AMR][1000 genomes]
rs73569472	1.00[AMR][1000 genomes]
rs73569494	1.00[AMR][1000 genomes]
rs73569499	1.00[AMR][1000 genomes]
rs73571223	1.00[AMR][1000 genomes]
rs73572285	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73574003	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73574011	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73574014	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73574084	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73576008	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73576044	1.00[AMR][1000 genomes]
rs73576100	1.00[AMR][1000 genomes]
rs73577114	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73578005	1.00[AMR][1000 genomes]
rs73578006	1.00[AMR][1000 genomes]
rs73585308	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7831056	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:8 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv948436	chr8:51115028-51917504	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS Bivalent Enhancer Strong transcription Genic enhancers Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
2	esv3514165	chr8:51416583-51923545	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Active TSS Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
3	esv3514166	chr8:51416583-51923545	Enhancers ZNF genes & repeats Weak transcription Flanking Active TSS Active TSS Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
4	nsv1027452	chr8:51525439-51725489	Enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
5	nsv1019760	chr8:51628619-51862150	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Active TSS	TF binding region Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
6	nsv1029698	chr8:51628619-51863635	Weak transcription Enhancers ZNF genes & repeats Active TSS Flanking Active TSS	TF binding region Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
7	nsv890874	chr8:51681031-51772697	Enhancers ZNF genes & repeats Weak transcription Active TSS	TF binding region Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
8	nsv890875	chr8:51681031-51780761	Enhancers Weak transcription ZNF genes & repeats Active TSS	TF binding region Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:51705000-51716800	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived

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