Variant report

Variant	rs73594799
Chromosome Location	chr11:121263658-121263659
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 13 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:13)

rs_ID	r²[population]
rs10892748	0.85[AMR][1000 genomes]
rs12808317	0.84[AFR][1000 genomes]
rs2370386	0.85[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs59836128	0.84[EUR][1000 genomes]
rs7122660	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7129425	0.84[EUR][1000 genomes]
rs7131426	0.85[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs73594753	0.84[EUR][1000 genomes]
rs73594788	0.85[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs73594790	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs73594792	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7944454	0.84[AFR][1000 genomes]
rs7948862	0.85[AMR][1000 genomes];0.92[EUR][1000 genomes]

No data

Chromatin state (count:21 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:121251200-121264800	Weak transcription	Primary T cells from cord blood	blood
2	chr11:121255200-121264200	Weak transcription	Right Ventricle	heart
3	chr11:121260600-121265200	Weak transcription	Psoas Muscle	Psoas
4	chr11:121260800-121265600	Weak transcription	Lung	lung
5	chr11:121261000-121265800	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
6	chr11:121261000-121277000	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
7	chr11:121261200-121265600	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
8	chr11:121262200-121265000	Enhancers	Rectal Mucosa Donor 31	rectum
9	chr11:121262200-121265200	Enhancers	Fetal Intestine Small	intestine
10	chr11:121262400-121264600	Enhancers	Stomach Mucosa	stomach
11	chr11:121262400-121265000	Enhancers	Duodenum Mucosa	Duodenum
12	chr11:121262400-121265000	Enhancers	Fetal Intestine Large	intestine
13	chr11:121262400-121265000	Enhancers	Rectal Mucosa Donor 29	rectum
14	chr11:121262600-121264200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
15	chr11:121262800-121263800	Weak transcription	Primary hematopoietic stem cells	blood
16	chr11:121262800-121264000	Enhancers	Primary hematopoietic stem cells short term culture	blood
17	chr11:121262800-121264400	Enhancers	Primary neutrophils fromperipheralblood	blood
18	chr11:121262800-121264800	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
19	chr11:121263000-121264000	Weak transcription	Primary monocytes fromperipheralblood	blood
20	chr11:121263000-121264000	Weak transcription	Esophagus	oesophagus
21	chr11:121263000-121264200	Weak transcription	Sigmoid Colon	Sigmoid Colon

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