Variant report

Variant	rs73597016
Chromosome Location	chr11:121870755-121870756
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 8 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:7)

rs_ID	r²[population]
rs73594911	1.00[AMR][1000 genomes]
rs73594926	1.00[AMR][1000 genomes]
rs73594931	1.00[AMR][1000 genomes]
rs73594993	1.00[AMR][1000 genomes]
rs73597003	1.00[AMR][1000 genomes]
rs73597004	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7926418	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv898429	chr11:121833245-121897762	Enhancers Weak transcription Flanking Active TSS Strong transcription Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:121869800-121870800	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
2	chr11:121870000-121870800	Enhancers	Cortex derived primary cultured neurospheres	brain
3	chr11:121870400-121871000	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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