Variant report

Variant	rs73598468
Chromosome Location	chr8:54403456-54403457
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:2)

rs_ID	r²[population]
rs16919206	0.90[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs73598462	0.92[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2752674	chr8:54181147-54483747	Flanking Active TSS Weak transcription Active TSS Enhancers ZNF genes & repeats Strong transcription Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:54399200-54408200	Weak transcription	Breast Myoepithelial Primary Cells	Breast
2	chr8:54400000-54407400	Weak transcription	Left Ventricle	heart
3	chr8:54400200-54407600	Weak transcription	Stomach Smooth Muscle	stomach
4	chr8:54401000-54412600	Weak transcription	Aorta	Aorta
5	chr8:54401400-54406800	Weak transcription	Right Ventricle	heart
6	chr8:54401600-54407400	Weak transcription	Ovary	ovary
7	chr8:54402200-54404800	Weak transcription	Fetal Heart	heart
8	chr8:54403400-54405800	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived

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dbSNP/dbVar ID: rs12345 /nsv7879
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chromosomal regions: chr1:12345-34567

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