Variant report
Variant | rs73598849 |
---|---|
Chromosome Location | chr10:16221046-16221047 |
allele | A/G/T |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
No data |
No data |
No data |
No data |
No data |
rs_ID | r2[population] |
---|---|
rs11813598 | 1.00[EUR][1000 genomes] |
rs11815171 | 0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs11816194 | 0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs17138404 | 1.00[EUR][1000 genomes] |
rs17138422 | 1.00[EUR][1000 genomes] |
rs17138433 | 1.00[EUR][1000 genomes] |
rs4559583 | 1.00[EUR][1000 genomes] |
rs56786131 | 1.00[EUR][1000 genomes] |
rs57041302 | 1.00[EUR][1000 genomes] |
rs57156702 | 0.96[AFR][1000 genomes];1.00[EUR][1000 genomes] |
rs57870435 | 1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs57908337 | 1.00[EUR][1000 genomes] |
rs60578728 | 0.96[AFR][1000 genomes];1.00[EUR][1000 genomes] |
rs7094183 | 1.00[EUR][1000 genomes] |
rs73589703 | 1.00[EUR][1000 genomes] |
rs73589747 | 1.00[EUR][1000 genomes] |
rs73589764 | 1.00[EUR][1000 genomes] |
rs73589767 | 1.00[EUR][1000 genomes] |
rs73589771 | 1.00[EUR][1000 genomes] |
rs73600965 | 1.00[EUR][1000 genomes] |
rs73606976 | 1.00[EUR][1000 genomes] |
rs73606983 | 1.00[EUR][1000 genomes] |
rs73606989 | 1.00[EUR][1000 genomes] |
rs73606991 | 1.00[EUR][1000 genomes] |
rs73606993 | 1.00[EUR][1000 genomes] |
rs73606994 | 1.00[EUR][1000 genomes] |
rs7901419 | 1.00[EUR][1000 genomes] |
rs7915627 | 1.00[EUR][1000 genomes] |
rs7922370 | 0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs7922899 | 0.84[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | nsv894900 | chr10:15285306-16232093 | Weak transcription Flanking Active TSS Strong transcription Enhancers Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNA | 16 gene(s) | inside rSNPs | diseases |
2 | nsv530146 | chr10:15722937-16522747 | Active TSS Strong transcription Weak transcription Enhancers Flanking Active TSS Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNA | 24 gene(s) | inside rSNPs | diseases |
3 | nsv1049806 | chr10:16065973-16228249 | Weak transcription Enhancers Flanking Active TSS Active TSS ZNF genes & repeats Bivalent Enhancer | TF binding regionCpG islandChromatin interactive regionlncRNA | 1 gene(s) | inside rSNPs | diseases |
4 | esv2488240 | chr10:16220574-16222080 | Weak transcription | n/a | n/a | inside rSNPs | diseases |
No data |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr10:16217400-16239000 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
2 | chr10:16220200-16223800 | Weak transcription | NHDF-Ad | bronchial |