Variant report

Variant	rs73601118
Chromosome Location	chr19:35813547-35813548
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr19:35812803..35814917-chr19:35816658..35818799,2	K562	blood:

Extended variants
information (count: 13 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:5)

rs_ID	r²[population]
rs57104528	1.00[AMR][1000 genomes]
rs58935762	1.00[AMR][1000 genomes]
rs60890836	1.00[AMR][1000 genomes]
rs73595434	1.00[AMR][1000 genomes]
rs73595439	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:8 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv432045	chr19:35556260-36520760	Flanking Active TSS Enhancers Active TSS Weak transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Strong transcription Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	191 gene(s)	inside rSNPs	diseases
2	nsv1060100	chr19:35658505-36170042	Weak transcription Bivalent Enhancer Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Strong transcription Genic enhancers Active TSS Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	107 gene(s)	inside rSNPs	diseases
3	nsv543993	chr19:35658505-36170042	Enhancers Strong transcription Active TSS Weak transcription Bivalent Enhancer Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	107 gene(s)	inside rSNPs	diseases
4	nsv510765	chr19:35708226-35890668	Flanking Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Enhancers Strong transcription Weak transcription Active TSS Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	67 gene(s)	inside rSNPs	diseases
5	esv2758497	chr19:35711078-35887113	Weak transcription Active TSS Enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Genic enhancers Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	67 gene(s)	inside rSNPs	diseases
6	esv2758758	chr19:35711078-35887113	Bivalent Enhancer Genic enhancers Weak transcription Strong transcription Enhancers Flanking Active TSS Bivalent/Poised TSS Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	67 gene(s)	inside rSNPs	diseases
7	nsv833810	chr19:35782588-35971959	Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS Strong transcription ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Genic enhancers Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	29 gene(s)	inside rSNPs	diseases
8	esv1828194	chr19:35812566-35865695	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Strong transcription Transcr. at gene 5' and 3' Active TSS Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA	15 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:20 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr19:35807800-35815800	Enhancers	Primary monocytes fromperipheralblood	blood
2	chr19:35810400-35835200	Weak transcription	Fetal Lung	lung
3	chr19:35810600-35817000	Weak transcription	HepG2	liver
4	chr19:35811400-35814600	Enhancers	Primary B cells from peripheral blood	blood
5	chr19:35811600-35814200	Enhancers	Primary B cells from cord blood	blood
6	chr19:35811600-35814800	Weak transcription	NHDF-Ad	bronchial
7	chr19:35811600-35832200	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
8	chr19:35811800-35817600	Weak transcription	Ovary	ovary
9	chr19:35812000-35815000	Weak transcription	Primary neutrophils fromperipheralblood	blood
10	chr19:35812000-35817600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
11	chr19:35812000-35817800	Weak transcription	Brain Substantia Nigra	brain
12	chr19:35812000-35819600	Weak transcription	Brain Cingulate Gyrus	brain
13	chr19:35812000-35820000	Weak transcription	Brain Inferior Temporal Lobe	brain
14	chr19:35812200-35814000	Weak transcription	Primary hematopoietic stem cells short term culture	blood
15	chr19:35812200-35817400	Weak transcription	Brain Hippocampus Middle	brain
16	chr19:35812200-35819400	Weak transcription	Primary hematopoietic stem cells	blood
17	chr19:35812800-35814000	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
18	chr19:35813200-35816200	Enhancers	Monocytes-CD14+_RO01746	blood
19	chr19:35813400-35814200	Enhancers	GM12878-XiMat	blood
20	chr19:35813400-35819800	Weak transcription	Fetal Adrenal Gland	Adrenal Gland

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