Variant report

Variant	rs73609758
Chromosome Location	chr10:18348056-18348057
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 7 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:6)

rs_ID	r²[population]
rs58948589	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73591712	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73591718	1.00[AMR][1000 genomes]
rs73591728	1.00[AMR][1000 genomes]
rs73609714	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73609756	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1039655	chr10:18252931-18348954	Weak transcription Enhancers Flanking Active TSS Active TSS ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region miRNA target site	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:18331600-18348800	Weak transcription	H9 Cell Line	embryonic stem cell
2	chr10:18346000-18349800	Enhancers	Fetal Heart	heart
3	chr10:18347600-18348200	Enhancers	Fetal Brain Male	brain
4	chr10:18347800-18349600	Enhancers	Fetal Lung	lung
5	chr10:18348000-18348600	Enhancers	Stomach Smooth Muscle	stomach
6	chr10:18348000-18349600	Enhancers	Fetal Brain Female	brain
7	chr10:18348000-18349800	Enhancers	Fetal Stomach	stomach

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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