Variant report

Variant	rs73617652
Chromosome Location	chr6:150706163-150706164
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 12 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:11)

rs_ID	r²[population]
rs11963823	0.83[AFR][1000 genomes]
rs59354427	0.93[AFR][1000 genomes]
rs73617636	0.96[AFR][1000 genomes]
rs73617672	0.83[AFR][1000 genomes]
rs73617673	0.83[AFR][1000 genomes]
rs73617678	0.83[AFR][1000 genomes]
rs73617682	0.83[AFR][1000 genomes]
rs73617694	0.93[AFR][1000 genomes]
rs73619503	0.89[AFR][1000 genomes]
rs73619510	0.89[AFR][1000 genomes]
rs73619523	0.89[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2763602	chr6:150581193-150720666	Enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Strong transcription Bivalent/Poised TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:150702200-150706200	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
2	chr6:150706000-150706200	Enhancers	Sigmoid Colon	Sigmoid Colon

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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