Variant report

Variant	rs73657150
Chromosome Location	chr9:101104565-101104566
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 9 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:6)

rs_ID	r²[population]
rs57684116	1.00[AMR][1000 genomes]
rs61650894	1.00[AMR][1000 genomes]
rs73492812	1.00[AMR][1000 genomes]
rs73657138	1.00[AMR][1000 genomes]
rs73657140	1.00[AMR][1000 genomes]
rs73657153	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv430085	chr9:100928245-101339645	Flanking Active TSS Enhancers Weak transcription Genic enhancers Strong transcription Bivalent/Poised TSS ZNF genes & repeats Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	19 gene(s)	inside rSNPs	diseases
2	nsv831663	chr9:100941048-101109492	Weak transcription Flanking Active TSS Strong transcription Enhancers Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Genic enhancers Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	17 gene(s)	inside rSNPs	diseases
3	nsv831664	chr9:101024862-101205637	Weak transcription Enhancers Bivalent Enhancer Flanking Active TSS ZNF genes & repeats Genic enhancers Strong transcription Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh	Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:13 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:101097600-101119600	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
2	chr9:101102800-101105400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
3	chr9:101103000-101105200	Enhancers	HUVEC	blood vessel
4	chr9:101103200-101105000	Flanking Active TSS	K562	blood
5	chr9:101103400-101108400	Weak transcription	Right Atrium	heart
6	chr9:101103600-101105000	Weak transcription	Brain Inferior Temporal Lobe	brain
7	chr9:101103600-101107400	Weak transcription	Lung	lung
8	chr9:101104000-101105200	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
9	chr9:101104000-101105600	Enhancers	Fetal Brain Female	brain
10	chr9:101104000-101105600	Enhancers	Fetal Muscle Trunk	muscle
11	chr9:101104200-101106400	Weak transcription	Cortex derived primary cultured neurospheres	brain
12	chr9:101104400-101105800	Enhancers	Brain Angular Gyrus	brain
13	chr9:101104400-101105800	Enhancers	Fetal Brain Male	brain

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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