Variant report

Variant	rs73683350
Chromosome Location	chr7:22370136-22370137
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr7:22362521..22364529-chr7:22368458..22371162,2	K562	blood:
2	chr7:22369000..22371197-chr7:22371330..22372832,2	K562	blood:

Extended variants
information (count: 4 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:3)

rs_ID	r²[population]
rs12669601	0.84[AFR][1000 genomes]
rs17146637	0.88[AMR][1000 genomes];0.82[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs59098991	0.84[AMR][1000 genomes];0.86[EUR][1000 genomes];0.98[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv830923	chr7:22316841-22494973	Enhancers Flanking Active TSS Strong transcription Weak transcription Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:42 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:22342200-22373200	Weak transcription	Lung	lung
2	chr7:22355000-22371800	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
3	chr7:22360600-22372400	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
4	chr7:22365400-22371800	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
5	chr7:22367200-22371200	Enhancers	H1 Cell Line	embryonic stem cell
6	chr7:22367800-22371600	Enhancers	HUES48 Cell Line	embryonic stem cell
7	chr7:22368000-22374000	Enhancers	ES-I3 Cell Line	embryonic stem cell
8	chr7:22368000-22374800	Enhancers	Fetal Intestine Large	intestine
9	chr7:22368200-22370200	Enhancers	K562	blood
10	chr7:22368200-22370800	Enhancers	H9 Cell Line	embryonic stem cell
11	chr7:22368200-22371200	Enhancers	Fetal Intestine Small	intestine
12	chr7:22368200-22374600	Enhancers	HUES64 Cell Line	embryonic stem cell
13	chr7:22368400-22370800	Enhancers	Fetal Thymus	thymus
14	chr7:22368400-22371600	Enhancers	iPS-18 Cell Line	embryonic stem cell
15	chr7:22368400-22371600	Enhancers	iPS-20b Cell Line	embryonic stem cell
16	chr7:22368400-22372200	Enhancers	iPS-15b Cell Line	embryonic stem cell
17	chr7:22368400-22374000	Enhancers	HUES6 Cell Line	embryonic stem cell
18	chr7:22368600-22370800	Enhancers	Duodenum Mucosa	Duodenum
19	chr7:22369000-22370200	Enhancers	Pancreas	Pancrea
20	chr7:22369000-22370200	Enhancers	Thymus	Thymus
21	chr7:22369000-22370800	Genic enhancers	Dnd41	blood
22	chr7:22369000-22371200	Enhancers	Small Intestine	intestine
23	chr7:22369200-22370800	Enhancers	Fetal Kidney	kidney
24	chr7:22369400-22370200	Enhancers	Esophagus	oesophagus
25	chr7:22369400-22370800	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
26	chr7:22369400-22370800	Enhancers	Stomach Mucosa	stomach
27	chr7:22369400-22374800	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
28	chr7:22369400-22394800	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
29	chr7:22369600-22370600	Enhancers	HepG2	liver
30	chr7:22369600-22370800	Enhancers	Liver	Liver
31	chr7:22369800-22370200	Enhancers	Breast Myoepithelial Primary Cells	Breast
32	chr7:22369800-22370200	Enhancers	Adipose Nuclei	Adipose
33	chr7:22369800-22370200	Enhancers	Left Ventricle	heart
34	chr7:22369800-22370200	Flanking Active TSS	Rectal Mucosa Donor 29	rectum
35	chr7:22369800-22370200	Flanking Active TSS	Rectal Mucosa Donor 31	rectum
36	chr7:22369800-22370600	Enhancers	Brain Cingulate Gyrus	brain
37	chr7:22369800-22370800	Enhancers	Colonic Mucosa	Colon
38	chr7:22369800-22370800	Enhancers	Sigmoid Colon	Sigmoid Colon
39	chr7:22370000-22373200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
40	chr7:22370000-22373400	Weak transcription	Gastric	stomach
41	chr7:22370000-22383800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
42	chr7:22370000-22384000	Weak transcription	Spleen	Spleen

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