Variant report

Variant	rs73684835
Chromosome Location	chr8:64180617-64180618
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 11 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:8)

rs_ID	r²[population]
rs56107220	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73684830	1.00[AFR][1000 genomes];0.85[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73684831	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73684832	0.80[AFR][1000 genomes];0.91[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73684833	1.00[EUR][1000 genomes]
rs73684834	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73686713	1.00[EUR][1000 genomes]
rs73686714	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv831342	chr8:64084331-64294941	Enhancers Flanking Active TSS Weak transcription Genic enhancers Strong transcription Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
2	nsv890967	chr8:64107847-64454446	Weak transcription Active TSS Enhancers Strong transcription Genic enhancers Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
3	esv1816645	chr8:64161544-64184282	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:64178000-64180800	Enhancers	Monocytes-CD14+_RO01746	blood
2	chr8:64178200-64182400	Enhancers	Primary monocytes fromperipheralblood	blood
3	chr8:64178400-64181800	Enhancers	Primary hematopoietic stem cells short term culture	blood
4	chr8:64178400-64182400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
5	chr8:64178800-64192800	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
6	chr8:64179200-64183000	Weak transcription	HSMM	muscle
7	chr8:64180000-64181400	Weak transcription	Primary hematopoietic stem cells	blood
8	chr8:64180400-64181400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
9	chr8:64180600-64181000	Enhancers	Primary neutrophils fromperipheralblood	blood

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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