Variant report

Variant	rs73686714
Chromosome Location	chr8:64144644-64144645
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 10 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:8)

rs_ID	r²[population]
rs56107220	1.00[EUR][1000 genomes]
rs73684830	1.00[EUR][1000 genomes]
rs73684831	1.00[EUR][1000 genomes]
rs73684832	1.00[EUR][1000 genomes]
rs73684833	1.00[EUR][1000 genomes]
rs73684835	1.00[EUR][1000 genomes]
rs73686713	1.00[EUR][1000 genomes]
rs73686731	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv831342	chr8:64084331-64294941	Enhancers Flanking Active TSS Weak transcription Genic enhancers Strong transcription Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
2	nsv890967	chr8:64107847-64454446	Weak transcription Active TSS Enhancers Strong transcription Genic enhancers Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:25 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:64143600-64144800	Enhancers	HSMMtube	muscle
2	chr8:64143600-64145200	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
3	chr8:64143600-64145200	Enhancers	HMEC	breast
4	chr8:64143800-64144800	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
5	chr8:64143800-64144800	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
6	chr8:64143800-64144800	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
7	chr8:64143800-64144800	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
8	chr8:64143800-64145200	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
9	chr8:64143800-64145400	Enhancers	NHEK	skin
10	chr8:64143800-64146200	Enhancers	HUVEC	blood vessel
11	chr8:64144000-64144800	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
12	chr8:64144000-64144800	Enhancers	Placenta Amnion	Placenta Amnion
13	chr8:64144000-64145600	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
14	chr8:64144000-64145600	Enhancers	Osteobl	bone
15	chr8:64144000-64145800	Enhancers	Hela-S3	cervix
16	chr8:64144000-64146200	Enhancers	Muscle Satellite Cultured Cells	--
17	chr8:64144200-64144800	Enhancers	ES-I3 Cell Line	embryonic stem cell
18	chr8:64144200-64144800	Enhancers	A549	lung
19	chr8:64144200-64144800	Enhancers	NHDF-Ad	bronchial
20	chr8:64144200-64144800	Enhancers	NHLF	lung
21	chr8:64144400-64144800	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
22	chr8:64144400-64144800	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
23	chr8:64144400-64144800	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
24	chr8:64144400-64145200	Weak transcription	HSMM	muscle
25	chr8:64144600-64144800	Flanking Active TSS	NH-A	brain

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