Variant report

Variant	rs736863
Chromosome Location	chr8:130492980-130492981
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr8:130492675..130494347-chr8:130542077..130543976,2	K562	blood:
2	chr8:130484819..130486542-chr8:130491250..130493226,2	K562	blood:
3	chr8:130481659..130484565-chr8:130492634..130494986,2	MCF-7	breast:

Extended variants
information (count: 12 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:11)

rs_ID	r²[population]
rs1108353	0.97[AFR][1000 genomes];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs16904084	0.97[AFR][1000 genomes];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs17262815	0.83[EUR][1000 genomes]
rs1897449	0.82[EUR][1000 genomes]
rs2017455	0.97[AFR][1000 genomes];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs61684115	0.83[EUR][1000 genomes]
rs67674260	0.82[EUR][1000 genomes]
rs72714253	0.82[EUR][1000 genomes]
rs72714255	0.83[EUR][1000 genomes]
rs73391885	0.97[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs755958	0.97[AFR][1000 genomes];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1015611	chr8:130449321-130502086	Enhancers Weak transcription Flanking Active TSS Strong transcription Genic enhancers ZNF genes & repeats Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	6 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:44 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:130487800-130494800	Genic enhancers	K562	blood
2	chr8:130490200-130503400	Weak transcription	Dnd41	blood
3	chr8:130491600-130493200	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
4	chr8:130491600-130493200	Enhancers	Brain Germinal Matrix	brain
5	chr8:130491600-130493800	Enhancers	Fetal Stomach	stomach
6	chr8:130491800-130493400	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
7	chr8:130491800-130493400	Enhancers	Cortex derived primary cultured neurospheres	brain
8	chr8:130491800-130493600	Enhancers	Rectal Smooth Muscle	rectum
9	chr8:130492000-130493000	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
10	chr8:130492000-130493000	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
11	chr8:130492000-130493200	Enhancers	NH-A	brain
12	chr8:130492000-130493200	Enhancers	Osteobl	bone
13	chr8:130492000-130493400	Enhancers	HSMM	muscle
14	chr8:130492000-130493600	Weak transcription	Ovary	ovary
15	chr8:130492000-130494000	Enhancers	Fetal Muscle Leg	muscle
16	chr8:130492200-130493000	Enhancers	ES-I3 Cell Line	embryonic stem cell
17	chr8:130492200-130493000	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
18	chr8:130492200-130493000	Enhancers	HUES48 Cell Line	embryonic stem cell
19	chr8:130492200-130493000	Enhancers	iPS-18 Cell Line	embryonic stem cell
20	chr8:130492200-130493000	Enhancers	Muscle Satellite Cultured Cells	--
21	chr8:130492200-130493000	Enhancers	Brain Angular Gyrus	brain
22	chr8:130492200-130493000	Enhancers	Placenta	Placenta
23	chr8:130492200-130493800	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
24	chr8:130492200-130493800	Weak transcription	NHLF	lung
25	chr8:130492400-130493000	Flanking Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
26	chr8:130492400-130493000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
27	chr8:130492400-130493000	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
28	chr8:130492400-130493200	Enhancers	HUES64 Cell Line	embryonic stem cell
29	chr8:130492600-130493000	Enhancers	Brain Dorsolateral Prefrontal Cortex	brain
30	chr8:130492600-130493000	Enhancers	Duodenum Smooth Muscle	Duodenum
31	chr8:130492600-130493000	Flanking Active TSS	Stomach Smooth Muscle	stomach
32	chr8:130492600-130496600	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
33	chr8:130492800-130493000	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
34	chr8:130492800-130493000	Enhancers	Brain Hippocampus Middle	brain
35	chr8:130492800-130493000	Enhancers	Fetal Muscle Trunk	muscle
36	chr8:130492800-130493000	Flanking Active TSS	HSMMtube	muscle
37	chr8:130492800-130493000	Enhancers	NHDF-Ad	bronchial
38	chr8:130492800-130493600	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
39	chr8:130492800-130493800	Enhancers	Colon Smooth Muscle	Colon
40	chr8:130492800-130496600	Weak transcription	iPS-20b Cell Line	embryonic stem cell
41	chr8:130492800-130496800	Weak transcription	HUES6 Cell Line	embryonic stem cell
42	chr8:130492800-130496800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
43	chr8:130492800-130497000	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
44	chr8:130492800-130497200	Weak transcription	H9 Cell Line	embryonic stem cell

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