Variant report

Variant	rs73688470
Chromosome Location	chr8:85180167-85180168
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 11 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:9)

rs_ID	r²[population]
rs55893605	1.00[AMR][1000 genomes]
rs58066601	1.00[AMR][1000 genomes]
rs58674714	1.00[AMR][1000 genomes]
rs73688467	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73688469	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73688484	0.80[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73688487	1.00[AMR][1000 genomes]
rs73688488	1.00[AMR][1000 genomes]
rs73688496	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2753846	chr8:84637092-85239703	Active TSS Bivalent Enhancer Enhancers Weak transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
2	nsv831374	chr8:85103604-85308976	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:85178000-85180400	Enhancers	HUES48 Cell Line	embryonic stem cell
2	chr8:85179600-85180600	Enhancers	HUES6 Cell Line	embryonic stem cell
3	chr8:85179600-85181000	Enhancers	Fetal Intestine Large	intestine
4	chr8:85179800-85180200	Enhancers	iPS-15b Cell Line	embryonic stem cell

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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