Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr7:25282673..25285317-chr7:25295486..25297509,2	K562	blood:

rSNPs within LD-proxies of this variant (count:22)

rs_ID	r²[population]
rs10232005	0.85[ASN][1000 genomes]
rs10245962	0.85[ASN][1000 genomes]
rs17151212	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1859210	0.93[ASN][1000 genomes]
rs2189295	1.00[ASN][1000 genomes]
rs2523094	0.81[ASN][1000 genomes]
rs2523096	0.85[ASN][1000 genomes]
rs2523097	0.85[ASN][1000 genomes]
rs2523098	0.84[ASN][1000 genomes]
rs2523099	0.84[ASN][1000 genomes]
rs2717874	0.85[ASN][1000 genomes]
rs2717892	0.83[ASN][1000 genomes]
rs2717893	0.83[ASN][1000 genomes]
rs2717917	0.83[ASN][1000 genomes]
rs2717918	0.83[ASN][1000 genomes]
rs2717919	0.83[ASN][1000 genomes]
rs2717920	0.83[ASN][1000 genomes]
rs2717922	0.83[ASN][1000 genomes]
rs55939158	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs57002799	0.81[ASN][1000 genomes]
rs757203	0.99[ASN][1000 genomes]
rs7785870	0.83[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv606424	chr7:24982529-25466521	Genic enhancers Flanking Active TSS Active TSS Enhancers Weak transcription Bivalent Enhancer Strong transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	79 gene(s)	inside rSNPs	diseases
2	nsv606426	chr7:25254125-25621579	Enhancers Bivalent Enhancer Flanking Active TSS Weak transcription Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:11 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:25275200-25284000	Weak transcription	Right Atrium	heart
2	chr7:25280600-25283600	Weak transcription	Colon Smooth Muscle	Colon
3	chr7:25282200-25284000	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
4	chr7:25282800-25284200	Enhancers	Fetal Brain Male	brain
5	chr7:25282800-25284400	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
6	chr7:25282800-25284400	Enhancers	Breast Myoepithelial Primary Cells	Breast
7	chr7:25283000-25284000	Enhancers	Fetal Kidney	kidney
8	chr7:25283200-25283600	Bivalent Enhancer	iPS-18 Cell Line	embryonic stem cell
9	chr7:25283200-25284000	Enhancers	Fetal Lung	lung
10	chr7:25283200-25284400	Enhancers	Fetal Muscle Leg	muscle
11	chr7:25283200-25284400	Enhancers	Ovary	ovary

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