Variant report

Variant	rs73691585
Chromosome Location	chr8:67685178-67685179
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 27 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:26)

rs_ID	r²[population]
rs11988681	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs11991125	1.00[AMR][1000 genomes]
rs11992829	1.00[AMR][1000 genomes]
rs35063782	0.91[AFR][1000 genomes]
rs56856536	0.91[AFR][1000 genomes]
rs58411534	0.85[AFR][1000 genomes]
rs60017659	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs60434307	0.91[AFR][1000 genomes]
rs6991442	0.82[AFR][1000 genomes]
rs6992429	0.82[AFR][1000 genomes]
rs7001796	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7001886	0.85[AFR][1000 genomes]
rs7003330	0.91[AFR][1000 genomes]
rs73691570	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73691574	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73691576	1.00[AMR][1000 genomes]
rs73691581	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73691596	0.94[AFR][1000 genomes]
rs73691602	0.91[AFR][1000 genomes]
rs73693607	0.85[AFR][1000 genomes]
rs73693608	0.91[AFR][1000 genomes]
rs73693609	0.91[AFR][1000 genomes]
rs73693616	0.85[AFR][1000 genomes]
rs73693617	0.85[AFR][1000 genomes]
rs73693618	0.85[AFR][1000 genomes]
rs9694590	0.91[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1026746	chr8:67639626-67794164	ZNF genes & repeats Weak transcription Flanking Active TSS Strong transcription Active TSS Enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	16 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:16 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:67664600-67686400	Weak transcription	Right Atrium	heart
2	chr8:67678000-67686200	Weak transcription	Primary monocytes fromperipheralblood	blood
3	chr8:67682200-67685800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
4	chr8:67683000-67686600	Enhancers	HepG2	liver
5	chr8:67683200-67686200	Weak transcription	Primary hematopoietic stem cells	blood
6	chr8:67683200-67686200	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
7	chr8:67683400-67686200	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
8	chr8:67684000-67685400	Weak transcription	Brain Angular Gyrus	brain
9	chr8:67684000-67686400	Weak transcription	Primary hematopoietic stem cells short term culture	blood
10	chr8:67684000-67686400	Weak transcription	Brain Inferior Temporal Lobe	brain
11	chr8:67684200-67685200	Weak transcription	Brain Substantia Nigra	brain
12	chr8:67684200-67686200	Weak transcription	Brain Cingulate Gyrus	brain
13	chr8:67684200-67686200	Weak transcription	Brain Hippocampus Middle	brain
14	chr8:67684200-67686400	Weak transcription	Brain Anterior Caudate	brain
15	chr8:67684400-67686200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
16	chr8:67684400-67686400	Weak transcription	Monocytes-CD14+_RO01746	blood

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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