Variant report

Variant	rs73694698
Chromosome Location	chr7:48660663-48660664
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 9 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:8)

rs_ID	r²[population]
rs17132522	0.96[AFR][1000 genomes]
rs1918591	1.00[AMR][1000 genomes]
rs55977086	1.00[AMR][1000 genomes]
rs60449227	1.00[AMR][1000 genomes]
rs73694669	1.00[AMR][1000 genomes]
rs73696907	0.96[AFR][1000 genomes]
rs73696909	0.85[AFR][1000 genomes]
rs7799752	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv830992	chr7:48497408-48686442	Weak transcription ZNF genes & repeats Enhancers Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS Strong transcription Genic enhancers Bivalent Enhancer	TF binding region CpG island Chromatin interactive region miRNA target site	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:48635800-48672200	Weak transcription	Primary hematopoietic stem cells	blood
2	chr7:48650200-48672200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
3	chr7:48654800-48669400	Strong transcription	Primary neutrophils fromperipheralblood	blood
4	chr7:48660200-48661200	Enhancers	Breast Myoepithelial Primary Cells	Breast
5	chr7:48660400-48660800	Enhancers	Fetal Brain Male	brain
6	chr7:48660400-48661200	Enhancers	Fetal Heart	heart
7	chr7:48660600-48661600	Enhancers	Fetal Lung	lung

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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