Variant report

Variant	rs73697715
Chromosome Location	chr8:91513950-91513951
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr8:91509461..91513264-chr8:91513664..91516256,3	K562	blood:
2	chr8:91513262..91514183-chr8:91583002..91584170,4	MCF-7	breast:
3	chr8:91513385..91515474-chr8:91527633..91529308,2	K562	blood:
4	chr8:91012056..91014977-chr8:91512985..91517287,3	MCF-7	breast:
5	chr8:91513470..91514260-chr8:91584696..91585610,2	MCF-7	breast:
6	chr8:91513251..91514938-chr8:91582272..91583858,15	MCF-7	breast:
7	chr8:91506491..91513264-chr8:91513360..91516300,7	K562	blood:

Variant related genes	Relation type
ENSG00000104325	Chromatin interaction

Extended variants
information (count: 43 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:43)

rs_ID	r²[population]
rs10089332	0.89[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs10091178	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10093767	0.92[ASN][1000 genomes]
rs10095288	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10098239	0.88[AFR][1000 genomes];0.80[AMR][1000 genomes]
rs10098532	0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10103375	0.88[AFR][1000 genomes];0.80[AMR][1000 genomes]
rs10105230	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10106046	0.88[AFR][1000 genomes];0.80[AMR][1000 genomes]
rs10106178	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10108945	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10109473	0.88[AFR][1000 genomes];0.80[AMR][1000 genomes]
rs10112962	0.89[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs10454349	0.89[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10808602	0.92[ASN][1000 genomes]
rs12114208	0.80[AMR][1000 genomes];0.89[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12114338	0.89[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12114484	0.80[AMR][1000 genomes];0.89[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs13438978	0.88[AFR][1000 genomes];0.80[AMR][1000 genomes]
rs16904659	0.89[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs28370967	0.85[AFR][1000 genomes];0.80[AMR][1000 genomes]
rs28418603	0.85[AFR][1000 genomes];0.80[AMR][1000 genomes]
rs28458242	0.88[AFR][1000 genomes];0.80[AMR][1000 genomes]
rs28571853	0.85[AFR][1000 genomes];0.80[AMR][1000 genomes]
rs28625286	0.80[AMR][1000 genomes]
rs28628063	0.80[AMR][1000 genomes]
rs28635136	0.85[AFR][1000 genomes]
rs28642916	0.88[AFR][1000 genomes];0.80[AMR][1000 genomes]
rs28646030	0.80[AMR][1000 genomes]
rs28654995	0.88[AFR][1000 genomes];0.80[AMR][1000 genomes]
rs28861773	0.84[AFR][1000 genomes];0.91[AMR][1000 genomes]
rs28880105	0.89[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs28884543	0.92[AFR][1000 genomes];0.91[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs4518620	0.89[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs4531005	0.80[AMR][1000 genomes];0.89[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs58288406	0.88[AFR][1000 genomes];0.80[AMR][1000 genomes]
rs59158124	0.88[AFR][1000 genomes];0.80[AMR][1000 genomes]
rs73697720	0.88[AFR][1000 genomes];0.80[AMR][1000 genomes]
rs73697729	0.81[AFR][1000 genomes];0.80[AMR][1000 genomes]
rs7813183	0.89[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7825039	0.88[AFR][1000 genomes];0.80[AMR][1000 genomes]
rs7834137	0.92[ASN][1000 genomes]
rs9642911	0.89[EUR][1000 genomes];0.92[ASN][1000 genomes]

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:91510000-91516600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
2	chr8:91512800-91514200	Enhancers	Cortex derived primary cultured neurospheres	brain
3	chr8:91512800-91514200	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
4	chr8:91513000-91514000	Enhancers	Brain Substantia Nigra	brain
5	chr8:91513000-91514000	Enhancers	Fetal Adrenal Gland	Adrenal Gland
6	chr8:91513200-91514000	Active TSS	Pancreatic Islets	Pancreatic Islet
7	chr8:91513200-91514200	Enhancers	Placenta Amnion	Placenta Amnion
8	chr8:91513400-91514000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
9	chr8:91513400-91514000	Enhancers	Brain Germinal Matrix	brain
10	chr8:91513400-91514000	Enhancers	HUVEC	blood vessel

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