Variant report

Variant	rs73702045
Chromosome Location	chr8:108370845-108370846
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr8:108369396..108371453-chr8:108377363..108379660,2	K562	blood:

Extended variants
information (count: 24 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:12)

rs_ID	r²[population]
rs58367511	1.00[AFR][1000 genomes]
rs60397972	1.00[AFR][1000 genomes]
rs61199517	1.00[AFR][1000 genomes]
rs73701023	1.00[AFR][1000 genomes]
rs73701083	1.00[AFR][1000 genomes]
rs73701085	1.00[AFR][1000 genomes]
rs73701088	1.00[AFR][1000 genomes]
rs73701099	1.00[AFR][1000 genomes]
rs73701101	1.00[AFR][1000 genomes]
rs73701102	1.00[AFR][1000 genomes]
rs73702034	1.00[AFR][1000 genomes]
rs73702051	1.00[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:12 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1029202	chr8:107796289-108384241	Enhancers Weak transcription Genic enhancers Active TSS Strong transcription Flanking Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
2	nsv539712	chr8:107796289-108384241	Enhancers Flanking Active TSS Weak transcription Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
3	nsv1034210	chr8:107796489-108384102	Enhancers Weak transcription Flanking Active TSS Strong transcription ZNF genes & repeats Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
4	nsv539713	chr8:107796489-108384102	Enhancers Weak transcription Genic enhancers Active TSS Flanking Active TSS Strong transcription ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
5	nsv915821	chr8:107796490-108393008	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Active TSS Genic enhancers Strong transcription Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
6	nsv1028726	chr8:107816841-108392547	Weak transcription Enhancers Flanking Active TSS Strong transcription Genic enhancers Active TSS ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
7	esv2764100	chr8:108220671-108469233	Enhancers Weak transcription Flanking Active TSS Strong transcription Genic enhancers Active TSS ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
8	nsv1030831	chr8:108224295-108466437	Enhancers Weak transcription Flanking Active TSS Strong transcription ZNF genes & repeats Active TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
9	nsv539714	chr8:108224295-108466437	Enhancers Flanking Active TSS Weak transcription Active TSS Strong transcription Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
10	nsv465760	chr8:108224687-108485912	Weak transcription Enhancers Genic enhancers Active TSS Flanking Active TSS Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
11	nsv611851	chr8:108224687-108485912	Enhancers Weak transcription Strong transcription Flanking Active TSS ZNF genes & repeats Genic enhancers Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases
12	esv1832253	chr8:108355808-108371820	Enhancers Weak transcription Flanking Active TSS Genic enhancers Strong transcription Active TSS	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:31 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:108345200-108393200	Weak transcription	Aorta	Aorta
2	chr8:108352400-108379000	Weak transcription	Psoas Muscle	Psoas
3	chr8:108357200-108375000	Weak transcription	Skeletal Muscle Male	skeletal muscle
4	chr8:108358600-108375200	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
5	chr8:108359000-108374400	Weak transcription	Adipose Nuclei	Adipose
6	chr8:108360400-108374400	Weak transcription	Fetal Heart	heart
7	chr8:108365800-108372600	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
8	chr8:108368000-108372400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
9	chr8:108368400-108372800	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
10	chr8:108368600-108371000	Enhancers	Fetal Lung	lung
11	chr8:108368800-108372000	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
12	chr8:108368800-108372200	Weak transcription	NHDF-Ad	bronchial
13	chr8:108369200-108377600	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
14	chr8:108369400-108372000	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
15	chr8:108369800-108371800	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
16	chr8:108369800-108372200	Weak transcription	Breast Myoepithelial Primary Cells	Breast
17	chr8:108370000-108371800	Weak transcription	Primary hematopoietic stem cells short term culture	blood
18	chr8:108370200-108372400	Enhancers	HUES64 Cell Line	embryonic stem cell
19	chr8:108370200-108381200	Weak transcription	Primary hematopoietic stem cells	blood
20	chr8:108370400-108371400	Enhancers	Osteobl	bone
21	chr8:108370400-108371600	Enhancers	Cortex derived primary cultured neurospheres	brain
22	chr8:108370400-108372000	Enhancers	HUES48 Cell Line	embryonic stem cell
23	chr8:108370400-108372000	Enhancers	iPS-18 Cell Line	embryonic stem cell
24	chr8:108370600-108371000	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
25	chr8:108370600-108371000	Enhancers	iPS-15b Cell Line	embryonic stem cell
26	chr8:108370600-108371000	Enhancers	Brain Cingulate Gyrus	brain
27	chr8:108370600-108371000	Enhancers	Brain Hippocampus Middle	brain
28	chr8:108370600-108371200	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
29	chr8:108370600-108372400	Enhancers	ES-I3 Cell Line	embryonic stem cell
30	chr8:108370800-108371000	Flanking Active TSS	iPS-20b Cell Line	embryonic stem cell
31	chr8:108370800-108371600	Enhancers	HUES6 Cell Line	embryonic stem cell

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