Variant report

Variant	rs73706221
Chromosome Location	chr8:120907582-120907583
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 13 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:4)

rs_ID	r²[population]
rs55836209	1.00[AFR][1000 genomes]
rs61607910	1.00[AFR][1000 genomes]
rs61672327	1.00[AFR][1000 genomes]
rs73702611	1.00[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:9 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv949368	chr8:120568034-121019872	Flanking Active TSS Flanking Bivalent TSS/Enh Genic enhancers Enhancers Weak transcription Strong transcription Bivalent/Poised TSS Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	27 gene(s)	inside rSNPs	diseases
2	nsv1021071	chr8:120589963-120968317	Strong transcription Flanking Active TSS Enhancers Active TSS ZNF genes & repeats Weak transcription Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	27 gene(s)	inside rSNPs	diseases
3	nsv891418	chr8:120600965-121301474	Active TSS Flanking Active TSS Weak transcription Strong transcription Enhancers Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	30 gene(s)	inside rSNPs	diseases
4	nsv465789	chr8:120636850-120994394	Enhancers Strong transcription Weak transcription Flanking Active TSS Active TSS Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	26 gene(s)	inside rSNPs	diseases
5	nsv612111	chr8:120636850-120994394	Flanking Active TSS Weak transcription Genic enhancers Strong transcription Enhancers ZNF genes & repeats Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	26 gene(s)	inside rSNPs	diseases
6	nsv427826	chr8:120642181-120953395	Weak transcription Strong transcription Enhancers Active TSS Flanking Active TSS Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	26 gene(s)	inside rSNPs	diseases
7	nsv1027974	chr8:120885478-121079658	Weak transcription Flanking Active TSS Enhancers Active TSS Strong transcription Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
8	nsv539739	chr8:120885478-121079658	Active TSS Enhancers Weak transcription Strong transcription Flanking Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent/Poised TSS Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
9	nsv972194	chr8:120898451-120965081	Enhancers Weak transcription Bivalent/Poised TSS Strong transcription Flanking Active TSS Active TSS Genic enhancers Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:37 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:120887200-120907600	Weak transcription	Pancreas	Pancrea
2	chr8:120898800-120907600	Weak transcription	Gastric	stomach
3	chr8:120903000-120924600	Weak transcription	Primary hematopoietic stem cells	blood
4	chr8:120903600-120908800	Enhancers	Fetal Adrenal Gland	Adrenal Gland
5	chr8:120903800-120909000	Enhancers	Fetal Intestine Large	intestine
6	chr8:120904400-120909000	Enhancers	Psoas Muscle	Psoas
7	chr8:120905600-120911800	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
8	chr8:120905600-120919200	Weak transcription	Fetal Kidney	kidney
9	chr8:120905800-120907600	Weak transcription	Brain Anterior Caudate	brain
10	chr8:120905800-120907800	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
11	chr8:120905800-120907800	Weak transcription	Stomach Smooth Muscle	stomach
12	chr8:120905800-120908400	Weak transcription	Brain Angular Gyrus	brain
13	chr8:120905800-120909800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
14	chr8:120905800-120910000	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
15	chr8:120905800-120917400	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
16	chr8:120905800-120918800	Weak transcription	Fetal Stomach	stomach
17	chr8:120906000-120908600	Weak transcription	Fetal Muscle Trunk	muscle
18	chr8:120906000-120910000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
19	chr8:120906400-120907600	Weak transcription	Brain Inferior Temporal Lobe	brain
20	chr8:120906400-120915600	Weak transcription	Brain Cingulate Gyrus	brain
21	chr8:120906600-120907600	Weak transcription	Left Ventricle	heart
22	chr8:120907000-120907600	Enhancers	Skeletal Muscle Female	skeletal muscle
23	chr8:120907000-120907800	Enhancers	Liver	Liver
24	chr8:120907200-120907600	Enhancers	Duodenum Mucosa	Duodenum
25	chr8:120907200-120908200	Enhancers	Small Intestine	intestine
26	chr8:120907200-120909000	Enhancers	Brain Hippocampus Middle	brain
27	chr8:120907200-120909000	Enhancers	Fetal Intestine Small	intestine
28	chr8:120907200-120909000	Enhancers	Ovary	ovary
29	chr8:120907400-120907600	Enhancers	iPS-15b Cell Line	embryonic stem cell
30	chr8:120907400-120907600	Enhancers	Duodenum Smooth Muscle	Duodenum
31	chr8:120907400-120907600	Flanking Active TSS	Skeletal Muscle Male	skeletal muscle
32	chr8:120907400-120907800	Enhancers	Brain Substantia Nigra	brain
33	chr8:120907400-120908200	Enhancers	Breast Myoepithelial Primary Cells	Breast
34	chr8:120907400-120908600	Weak transcription	Fetal Muscle Leg	muscle
35	chr8:120907400-120908800	Enhancers	Stomach Mucosa	stomach
36	chr8:120907400-120908800	Flanking Active TSS	HepG2	liver
37	chr8:120907400-120909800	Weak transcription	Colon Smooth Muscle	Colon

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