Variant report

Variant	rs73706313
Chromosome Location	chr8:112241943-112241944
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 10 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:7)

rs_ID	r²[population]
rs59305568	0.91[AFR][1000 genomes]
rs73703833	0.91[AFR][1000 genomes]
rs73705836	0.91[AFR][1000 genomes]
rs73706314	1.00[AFR][1000 genomes]
rs73706315	1.00[AFR][1000 genomes]
rs73706316	1.00[AFR][1000 genomes]
rs73706317	1.00[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1030494	chr8:111779352-112421812	Weak transcription Enhancers Flanking Active TSS Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Strong transcription Genic enhancers Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	16 gene(s)	inside rSNPs	diseases
2	nsv891311	chr8:112088322-112604086	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Active TSS Bivalent Enhancer Strong transcription Genic enhancers Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
3	nsv1034184	chr8:112171949-112274721	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:112239800-112242200	Enhancers	iPS-15b Cell Line	embryonic stem cell
2	chr8:112240400-112242200	Enhancers	HUES6 Cell Line	embryonic stem cell
3	chr8:112240800-112242000	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
4	chr8:112241000-112242200	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
5	chr8:112241000-112242600	Enhancers	HUES48 Cell Line	embryonic stem cell
6	chr8:112241000-112242800	Enhancers	iPS-18 Cell Line	embryonic stem cell
7	chr8:112241000-112243000	Enhancers	HUES64 Cell Line	embryonic stem cell
8	chr8:112241000-112243000	Enhancers	iPS-20b Cell Line	embryonic stem cell
9	chr8:112241200-112242000	Enhancers	H1 Cell Line	embryonic stem cell
10	chr8:112241200-112242200	Enhancers	ES-I3 Cell Line	embryonic stem cell

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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