Variant report

Variant	rs73707704
Chromosome Location	chr8:127859408-127859409
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 5 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:3)

rs_ID	r²[population]
rs73705598	0.88[AFR][1000 genomes]
rs73705599	1.00[AFR][1000 genomes]
rs73707708	0.88[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv1819408	chr8:127835876-127898165	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
2	nsv6382	chr8:127845446-127890549	Enhancers Flanking Active TSS Weak transcription Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:18 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:127847600-127860000	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
2	chr8:127857000-127859600	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
3	chr8:127857400-127862000	Weak transcription	Fetal Kidney	kidney
4	chr8:127857600-127861400	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
5	chr8:127857800-127859800	Enhancers	HSMMtube	muscle
6	chr8:127857800-127860200	Enhancers	Fetal Muscle Leg	muscle
7	chr8:127858000-127860200	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
8	chr8:127858000-127860200	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
9	chr8:127858000-127866400	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
10	chr8:127858400-127859600	Enhancers	Cortex derived primary cultured neurospheres	brain
11	chr8:127858400-127861000	Weak transcription	Muscle Satellite Cultured Cells	--
12	chr8:127858600-127860000	Weak transcription	HMEC	breast
13	chr8:127858600-127861000	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
14	chr8:127858600-127869400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
15	chr8:127859000-127860000	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
16	chr8:127859000-127860200	Enhancers	Breast Myoepithelial Primary Cells	Breast
17	chr8:127859400-127860000	Weak transcription	Psoas Muscle	Psoas
18	chr8:127859400-127861200	Weak transcription	HUES6 Cell Line	embryonic stem cell

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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