Variant report

Variant	rs73725256
Chromosome Location	chr6:16852765-16852766
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 17 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:17)

rs_ID	r²[population]
rs10949386	0.88[ASN][1000 genomes]
rs11961262	0.89[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12204538	0.88[ASN][1000 genomes]
rs1240835	0.88[ASN][1000 genomes]
rs1240839	0.88[ASN][1000 genomes]
rs12526123	0.95[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs12526558	0.86[AMR][1000 genomes]
rs12529203	0.82[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2797805	0.88[ASN][1000 genomes]
rs57192327	0.95[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs57489962	0.86[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs59690250	0.86[AMR][1000 genomes]
rs6459487	0.87[ASN][1000 genomes]
rs9464950	0.83[AFR][1000 genomes];0.88[ASN][1000 genomes]
rs9464951	0.84[AFR][1000 genomes];0.88[ASN][1000 genomes]
rs9464952	0.87[ASN][1000 genomes]
rs9477235	0.88[ASN][1000 genomes]

No data

Chromatin state (count:18 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:16847800-16853600	Enhancers	Primary monocytes fromperipheralblood	blood
2	chr6:16849400-16853000	Enhancers	Primary hematopoietic stem cells	blood
3	chr6:16849800-16853400	Enhancers	Primary hematopoietic stem cells short term culture	blood
4	chr6:16849800-16853600	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
5	chr6:16850200-16855000	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
6	chr6:16851200-16855400	Weak transcription	HSMMtube	muscle
7	chr6:16851600-16855200	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
8	chr6:16851800-16852800	Flanking Active TSS	Monocytes-CD14+_RO01746	blood
9	chr6:16852000-16852800	Enhancers	Fetal Lung	lung
10	chr6:16852200-16855400	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
11	chr6:16852400-16853200	Enhancers	GM12878-XiMat	blood
12	chr6:16852400-16855200	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
13	chr6:16852400-16855200	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
14	chr6:16852400-16855400	Weak transcription	NHDF-Ad	bronchial
15	chr6:16852400-16856400	Weak transcription	Adipose Nuclei	Adipose
16	chr6:16852600-16853200	Enhancers	Breast Myoepithelial Primary Cells	Breast
17	chr6:16852600-16853400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
18	chr6:16852600-16855000	Weak transcription	Hela-S3	cervix

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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