The 2.0 version of rSNPBase

Variant report

Variant rs9464952
Chromosome Location chr6:16850110-16850111
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:62 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:16847800-16853600 Enhancers Primary monocytes fromperipheralblood blood
2 chr6:16849000-16852200 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
3 chr6:16849200-16850200 Enhancers Primary T helper naive cells from peripheral blood blood
4 chr6:16849200-16850600 Enhancers Primary T helper memory cells from peripheral blood 2 blood
5 chr6:16849200-16850800 Enhancers Fetal Adrenal Gland Adrenal Gland
6 chr6:16849200-16851000 Enhancers HSMM muscle
7 chr6:16849200-16852400 Enhancers NHDF-Ad bronchial
8 chr6:16849400-16850200 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
9 chr6:16849400-16850200 Enhancers Primary T helper memory cells from peripheral blood 1 blood
10 chr6:16849400-16850200 Enhancers Primary T regulatory cells fromperipheralblood blood
11 chr6:16849400-16850400 Enhancers Primary T cells from cord blood blood
12 chr6:16849400-16850600 Enhancers Primary T helper cells PMA-I stimulated --
13 chr6:16849400-16853000 Enhancers Primary hematopoietic stem cells blood
14 chr6:16849600-16850200 Flanking Active TSS HSMMtube muscle
15 chr6:16849600-16850400 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
16 chr6:16849600-16850400 Flanking Active TSS Muscle Satellite Cultured Cells --
17 chr6:16849600-16850400 Enhancers Aorta Aorta
18 chr6:16849600-16850400 Enhancers Brain Anterior Caudate brain
19 chr6:16849600-16850600 Enhancers HUES64 Cell Line embryonic stem cell
20 chr6:16849600-16850600 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
21 chr6:16849600-16850600 Enhancers Stomach Mucosa stomach
22 chr6:16849600-16850600 Flanking Active TSS Osteobl bone
23 chr6:16849600-16850800 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
24 chr6:16849600-16850800 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
25 chr6:16849600-16850800 Enhancers Fetal Lung lung
26 chr6:16849600-16850800 Enhancers Fetal Muscle Leg muscle
27 chr6:16849600-16850800 Enhancers Psoas Muscle Psoas
28 chr6:16849600-16851800 Enhancers Brain Germinal Matrix brain
29 chr6:16849600-16852000 Enhancers Cortex derived primary cultured neurospheres brain
30 chr6:16849800-16850200 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
31 chr6:16849800-16850200 Flanking Active TSS Skeletal Muscle Male skeletal muscle
32 chr6:16849800-16850200 Active TSS Skeletal Muscle Female skeletal muscle
33 chr6:16849800-16850400 Flanking Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
34 chr6:16849800-16850400 Flanking Active TSS NH-A brain
35 chr6:16849800-16850400 Enhancers NHLF lung
36 chr6:16849800-16850600 Enhancers ES-I3 Cell Line embryonic stem cell
37 chr6:16849800-16850600 Enhancers Primary B cells from cord blood blood
38 chr6:16849800-16850600 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
39 chr6:16849800-16850600 Enhancers Fetal Brain Female brain
40 chr6:16849800-16850800 Enhancers H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
41 chr6:16849800-16850800 Enhancers Fetal Brain Male brain
42 chr6:16849800-16850800 Enhancers Fetal Thymus thymus
43 chr6:16849800-16850800 Enhancers Placenta Amnion Placenta Amnion
44 chr6:16849800-16850800 Flanking Active TSS Hela-S3 cervix
45 chr6:16849800-16851400 Enhancers HUES48 Cell Line embryonic stem cell
46 chr6:16849800-16853400 Enhancers Primary hematopoietic stem cells short term culture blood
47 chr6:16849800-16853600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
48 chr6:16850000-16850200 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
49 chr6:16850000-16850200 Bivalent Enhancer Primary B cells from peripheral blood blood
50 chr6:16850000-16850200 ZNF genes & repeats GM12878-XiMat blood

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Last update: Aug 31, 2015