Variant report

Variant	rs73730531
Chromosome Location	chr6:37089462-37089463
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr6:37088088..37090801-chr6:37092743..37094400,2	MCF-7	breast:
2	chr6:37087210..37090085-chr6:37092533..37095828,3	K562	blood:

Extended variants
information (count: 6 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:5)

rs_ID	r²[population]
rs6929632	1.00[EUR][1000 genomes]
rs6934364	1.00[EUR][1000 genomes]
rs6940883	1.00[EUR][1000 genomes]
rs73730528	1.00[EUR][1000 genomes]
rs9462261	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1030015	chr6:36818510-37104446	Active TSS Enhancers Flanking Active TSS Weak transcription Genic enhancers Strong transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	41 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:24 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:37073600-37090600	Weak transcription	iPS-15b Cell Line	embryonic stem cell
2	chr6:37075200-37091000	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
3	chr6:37079000-37092400	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
4	chr6:37079200-37092600	Weak transcription	Fetal Intestine Small	intestine
5	chr6:37083400-37090400	Weak transcription	ES-I3 Cell Line	embryonic stem cell
6	chr6:37083400-37090800	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
7	chr6:37084600-37093400	Weak transcription	Primary neutrophils fromperipheralblood	blood
8	chr6:37084800-37091200	Weak transcription	K562	blood
9	chr6:37084800-37093400	Weak transcription	Primary monocytes fromperipheralblood	blood
10	chr6:37085400-37090800	Weak transcription	HUES48 Cell Line	embryonic stem cell
11	chr6:37085400-37092000	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
12	chr6:37087000-37093600	Enhancers	HepG2	liver
13	chr6:37088000-37090800	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
14	chr6:37088000-37090800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
15	chr6:37088000-37091000	Weak transcription	Placenta	Placenta
16	chr6:37088000-37093400	Weak transcription	Hela-S3	cervix
17	chr6:37089000-37089600	Genic enhancers	H1 Cell Line	embryonic stem cell
18	chr6:37089200-37089600	Enhancers	H9 Cell Line	embryonic stem cell
19	chr6:37089200-37089600	Enhancers	iPS-18 Cell Line	embryonic stem cell
20	chr6:37089200-37089600	Enhancers	iPS-20b Cell Line	embryonic stem cell
21	chr6:37089200-37089600	Genic enhancers	ES-UCSF4 Cell Line	embryonic stem cell
22	chr6:37089200-37089800	Enhancers	HUES64 Cell Line	embryonic stem cell
23	chr6:37089400-37089800	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
24	chr6:37089400-37089800	Enhancers	HUES6 Cell Line	embryonic stem cell

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