Variant report

Variant	rs73739815
Chromosome Location	chr7:141069743-141069744
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 8 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:5)

rs_ID	r²[population]
rs10274567	0.81[ASN][1000 genomes]
rs1859575	0.85[ASN][1000 genomes]
rs73739814	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73739820	0.90[ASN][1000 genomes]
rs73739821	0.86[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv831160	chr7:141009011-141188046	Enhancers Weak transcription Flanking Active TSS Strong transcription Active TSS ZNF genes & repeats Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
2	esv34135	chr7:141047454-141492898	Active TSS Enhancers Weak transcription Strong transcription Genic enhancers Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	61 gene(s)	inside rSNPs	diseases
3	esv3429325	chr7:141064185-141196253	Weak transcription Enhancers Flanking Active TSS Genic enhancers Active TSS Bivalent/Poised TSS Bivalent Enhancer Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:28 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:141062600-141081800	Weak transcription	Fetal Brain Female	brain
2	chr7:141062800-141069800	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
3	chr7:141062800-141070200	Weak transcription	Brain Angular Gyrus	brain
4	chr7:141063600-141070600	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
5	chr7:141065000-141070200	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
6	chr7:141065200-141071400	Weak transcription	Right Ventricle	heart
7	chr7:141066400-141071800	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
8	chr7:141066800-141069800	Weak transcription	Psoas Muscle	Psoas
9	chr7:141067400-141069800	Weak transcription	Brain Hippocampus Middle	brain
10	chr7:141067400-141074200	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
11	chr7:141067400-141075600	Weak transcription	H9 Cell Line	embryonic stem cell
12	chr7:141067800-141071400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
13	chr7:141068400-141070000	Enhancers	H1 Cell Line	embryonic stem cell
14	chr7:141068400-141070000	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
15	chr7:141068600-141070200	Enhancers	Left Ventricle	heart
16	chr7:141068600-141071200	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
17	chr7:141068800-141070000	Enhancers	Colon Smooth Muscle	Colon
18	chr7:141068800-141070200	Enhancers	Cortex derived primary cultured neurospheres	brain
19	chr7:141068800-141070400	Enhancers	Brain Germinal Matrix	brain
20	chr7:141069000-141070000	Enhancers	Fetal Brain Male	brain
21	chr7:141069200-141070000	Enhancers	Adipose Nuclei	Adipose
22	chr7:141069200-141070000	Enhancers	Duodenum Smooth Muscle	Duodenum
23	chr7:141069400-141069800	Enhancers	ES-I3 Cell Line	embryonic stem cell
24	chr7:141069400-141070800	Enhancers	Brain Anterior Caudate	brain
25	chr7:141069600-141070200	Enhancers	Right Atrium	heart
26	chr7:141069600-141070400	Enhancers	Skeletal Muscle Male	skeletal muscle
27	chr7:141069600-141070600	Enhancers	Pancreatic Islets	Pancreatic Islet
28	chr7:141069600-141070800	Enhancers	Skeletal Muscle Female	skeletal muscle

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