Variant report

Variant	rs73747163
Chromosome Location	chr6:72219299-72219300
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr6:72218341..72221000-chr6:72791973..72794770,2	K562	blood:
2	chr6:72212184..72214123-chr6:72218579..72220486,2	K562	blood:

Extended variants
information (count: 5 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:4)

rs_ID	r²[population]
rs17548083	1.00[AFR][1000 genomes]
rs55712536	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs55993527	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs56067555	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv830684	chr6:72094842-72282684	Enhancers Active TSS Weak transcription Flanking Active TSS Bivalent/Poised TSS Strong transcription Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	488 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:27 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:72217200-72219600	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
2	chr6:72218400-72220800	Enhancers	Fetal Lung	lung
3	chr6:72218400-72220800	Enhancers	HSMMtube	muscle
4	chr6:72218600-72219400	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
5	chr6:72218600-72220600	Enhancers	Muscle Satellite Cultured Cells	--
6	chr6:72218600-72220800	Enhancers	HSMM	muscle
7	chr6:72218800-72219400	Enhancers	Fetal Stomach	stomach
8	chr6:72218800-72220000	Enhancers	ES-I3 Cell Line	embryonic stem cell
9	chr6:72218800-72220000	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
10	chr6:72218800-72220000	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
11	chr6:72218800-72220000	Enhancers	Cortex derived primary cultured neurospheres	brain
12	chr6:72218800-72220200	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
13	chr6:72218800-72220400	Enhancers	NHLF	lung
14	chr6:72218800-72220600	Enhancers	Rectal Smooth Muscle	rectum
15	chr6:72219000-72219600	Weak transcription	Brain Hippocampus Middle	brain
16	chr6:72219000-72219600	Weak transcription	Fetal Muscle Leg	muscle
17	chr6:72219000-72220200	Enhancers	Osteobl	bone
18	chr6:72219000-72220400	Enhancers	Hela-S3	cervix
19	chr6:72219000-72220600	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
20	chr6:72219000-72220800	Enhancers	Fetal Kidney	kidney
21	chr6:72219200-72219600	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
22	chr6:72219200-72219600	Weak transcription	Aorta	Aorta
23	chr6:72219200-72220200	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
24	chr6:72219200-72220200	Enhancers	Brain Cingulate Gyrus	brain
25	chr6:72219200-72220400	Enhancers	Brain Anterior Caudate	brain
26	chr6:72219200-72220400	Enhancers	Stomach Smooth Muscle	stomach
27	chr6:72219200-72220400	Enhancers	NHDF-Ad	bronchial

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