Variant report

Variant	rs73749841
Chromosome Location	chr6:71978449-71978450
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 14 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:14)

rs_ID	r²[population]
rs56970720	0.89[AFR][1000 genomes];0.87[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs57030534	0.83[AFR][1000 genomes]
rs58216734	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs58397574	0.89[AFR][1000 genomes];0.87[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs60555932	0.87[AFR][1000 genomes]
rs60772436	0.96[AFR][1000 genomes];0.87[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6921743	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6923056	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73503169	0.81[EUR][1000 genomes]
rs73503172	0.81[EUR][1000 genomes]
rs73503175	0.81[EUR][1000 genomes]
rs73749839	1.00[EUR][1000 genomes]
rs73749844	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73749853	0.87[AFR][1000 genomes];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:71968000-71980400	Weak transcription	Aorta	Aorta
2	chr6:71976400-71980000	Weak transcription	Spleen	Spleen
3	chr6:71976400-71980400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
4	chr6:71978000-71979000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
5	chr6:71978400-71978600	Flanking Active TSS	GM12878-XiMat	blood
6	chr6:71978400-71979000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
7	chr6:71978400-71979400	Enhancers	Breast Myoepithelial Primary Cells	Breast
8	chr6:71978400-71979400	Enhancers	Primary B cells from peripheral blood	blood

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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