Variant report

Variant	rs73757711
Chromosome Location	chr5:57412099-57412100
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:2)

rs_ID	r²[population]
rs16887869	1.00[AMR][1000 genomes]
rs56170564	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1033051	chr5:57380218-57471801	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:57408400-57413400	Weak transcription	Breast Myoepithelial Primary Cells	Breast
2	chr5:57410400-57412600	Enhancers	Psoas Muscle	Psoas
3	chr5:57410600-57412600	Enhancers	Fetal Muscle Leg	muscle
4	chr5:57410600-57414600	Weak transcription	HSMMtube	muscle
5	chr5:57410600-57416200	Enhancers	Pancreatic Islets	Pancreatic Islet
6	chr5:57410800-57412400	Enhancers	Skeletal Muscle Female	skeletal muscle
7	chr5:57411400-57412600	Enhancers	Skeletal Muscle Male	skeletal muscle
8	chr5:57412000-57413800	Enhancers	Fetal Kidney	kidney

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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