Variant report

Variant	rs73765223
Chromosome Location	chr6:113807729-113807730
allele	C/G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 17 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:15)

rs_ID	r²[population]
rs61338105	1.00[AMR][1000 genomes]
rs73765220	1.00[AFR][1000 genomes]
rs73765222	1.00[AMR][1000 genomes]
rs73765226	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73765227	1.00[AMR][1000 genomes]
rs73765228	1.00[AMR][1000 genomes]
rs73765230	1.00[AMR][1000 genomes]
rs73768426	1.00[AMR][1000 genomes]
rs73768431	1.00[AFR][1000 genomes]
rs73768440	1.00[AFR][1000 genomes]
rs73768443	1.00[AMR][1000 genomes]
rs73768445	1.00[AMR][1000 genomes]
rs73768446	1.00[AFR][1000 genomes]
rs73768447	1.00[AMR][1000 genomes]
rs73768450	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv916294	chr6:113518489-113904305	Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Active TSS Genic enhancers Flanking Bivalent TSS/Enh Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	17 gene(s)	inside rSNPs	diseases
2	nsv522088	chr6:113788356-113809585	Enhancers Flanking Active TSS Weak transcription	Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:113801200-113810200	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
2	chr6:113807200-113807800	Enhancers	Primary monocytes fromperipheralblood	blood
3	chr6:113807200-113808000	Enhancers	Monocytes-CD14+_RO01746	blood
4	chr6:113807200-113808200	Flanking Active TSS	Primary neutrophils fromperipheralblood	blood
5	chr6:113807200-113808200	Enhancers	Placenta	Placenta

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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