Variant report

Variant	rs73766467
Chromosome Location	chr6:118521986-118521987
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 13 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:9)

rs_ID	r²[population]
rs4132663	1.00[AMR][1000 genomes]
rs5003341	1.00[AMR][1000 genomes]
rs55752923	1.00[AMR][1000 genomes]
rs56714111	1.00[AMR][1000 genomes]
rs58861108	1.00[AMR][1000 genomes]
rs73766431	1.00[AMR][1000 genomes]
rs73768145	1.00[AMR][1000 genomes]
rs7775102	1.00[AMR][1000 genomes]
rs7775110	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv530526	chr6:118027339-118718476	Weak transcription Enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS Active TSS Strong transcription ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	4 gene(s)	inside rSNPs	diseases
2	nsv428153	chr6:118430517-118586974	Weak transcription Enhancers Strong transcription Active TSS ZNF genes & repeats Flanking Active TSS	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
3	nsv1030089	chr6:118436482-118604516	Enhancers Weak transcription Flanking Active TSS Strong transcription Active TSS ZNF genes & repeats Bivalent Enhancer Genic enhancers	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
4	nsv538427	chr6:118436482-118604516	Enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS Strong transcription Bivalent Enhancer Genic enhancers	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:118519200-118523600	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
2	chr6:118520400-118524000	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
3	chr6:118520400-118526000	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
4	chr6:118521000-118523600	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
5	chr6:118521600-118523200	Weak transcription	Cortex derived primary cultured neurospheres	brain
6	chr6:118521600-118523600	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
7	chr6:118521800-118522000	Enhancers	H9 Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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