Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr6:118334788..118337364-chr6:118342018..118344547,2	K562	blood:

rSNPs within LD-proxies of this variant (count:29)

rs_ID	r²[population]
rs12110607	1.00[EUR][1000 genomes]
rs205950	1.00[MEX][hapmap]
rs4276535	1.00[EUR][1000 genomes]
rs4307205	1.00[EUR][1000 genomes]
rs4509154	1.00[MEX][hapmap];0.93[MKK][hapmap];1.00[TSI][hapmap]
rs4587199	1.00[EUR][1000 genomes]
rs5003341	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs55752923	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs56714111	1.00[AMR][1000 genomes]
rs56993874	1.00[EUR][1000 genomes]
rs58861108	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs60541620	0.88[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs61019727	1.00[EUR][1000 genomes]
rs6568998	1.00[EUR][1000 genomes]
rs6901514	1.00[EUR][1000 genomes]
rs6935478	1.00[EUR][1000 genomes]
rs73521541	1.00[EUR][1000 genomes]
rs73525652	1.00[EUR][1000 genomes]
rs73766425	1.00[EUR][1000 genomes]
rs73766431	1.00[AMR][1000 genomes]
rs73766467	1.00[AMR][1000 genomes]
rs73768126	1.00[AMR][1000 genomes]
rs73768145	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7775102	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7775110	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs9385033	1.00[EUR][1000 genomes]
rs9385034	1.00[TSI][hapmap];1.00[EUR][1000 genomes]
rs9387541	1.00[EUR][1000 genomes]
rs9489309	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv530526	chr6:118027339-118718476	Weak transcription Enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS Active TSS Strong transcription ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:118338800-118344400	Weak transcription	Fetal Brain Female	brain
2	chr6:118338800-118352400	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
3	chr6:118339000-118347200	Weak transcription	Cortex derived primary cultured neurospheres	brain

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