The 2.0 version of rSNPBase

Variant report

Variant rs73768067
Chromosome Location chr5:80611792-80611793
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:66 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:80598200-80612400 Weak transcription ES-WA7 Cell Line embryonic stem cell
2 chr5:80598600-80611800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
3 chr5:80599200-80612200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
4 chr5:80601400-80612400 Weak transcription Colon Smooth Muscle Colon
5 chr5:80601400-80612400 Weak transcription Thymus Thymus
6 chr5:80606800-80611800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
7 chr5:80607000-80612400 Weak transcription Rectal Smooth Muscle rectum
8 chr5:80607000-80612800 Weak transcription Fetal Intestine Small intestine
9 chr5:80607200-80612800 Weak transcription Brain Hippocampus Middle brain
10 chr5:80608400-80612400 Weak transcription GM12878-XiMat blood
11 chr5:80608600-80612600 Weak transcription Fetal Intestine Large intestine
12 chr5:80608600-80615800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
13 chr5:80608600-80623000 Weak transcription Psoas Muscle Psoas
14 chr5:80609800-80612800 Weak transcription HUES6 Cell Line embryonic stem cell
15 chr5:80609800-80613000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
16 chr5:80609800-80613400 Weak transcription Primary neutrophils fromperipheralblood blood
17 chr5:80609800-80613600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
18 chr5:80610000-80612200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
19 chr5:80610000-80612400 Weak transcription Primary hematopoietic stem cells blood
20 chr5:80610000-80614600 Weak transcription Primary T cells fromperipheralblood blood
21 chr5:80610000-80618000 Weak transcription Primary hematopoietic stem cells short term culture blood
22 chr5:80610200-80611800 Weak transcription Gastric stomach
23 chr5:80610400-80612000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
24 chr5:80610400-80612200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
25 chr5:80610400-80612400 Enhancers NHDF-Ad bronchial
26 chr5:80610400-80613000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
27 chr5:80610600-80611800 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
28 chr5:80610600-80612000 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
29 chr5:80610600-80612200 Weak transcription Primary T helper cells fromperipheralblood blood
30 chr5:80610600-80612200 Weak transcription Duodenum Smooth Muscle Duodenum
31 chr5:80610600-80612200 Weak transcription Placenta Placenta
32 chr5:80610600-80612200 Weak transcription Dnd41 blood
33 chr5:80610600-80613000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
34 chr5:80610600-80621800 Weak transcription Fetal Adrenal Gland Adrenal Gland
35 chr5:80610800-80611800 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
36 chr5:80610800-80611800 Strong transcription HSMM muscle
37 chr5:80610800-80612400 Weak transcription Breast Myoepithelial Primary Cells Breast
38 chr5:80610800-80612400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
39 chr5:80610800-80612800 Weak transcription Adipose Nuclei Adipose
40 chr5:80610800-80613000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
41 chr5:80610800-80613000 Weak transcription Primary T regulatory cells fromperipheralblood blood
42 chr5:80610800-80613400 Weak transcription Skeletal Muscle Female skeletal muscle
43 chr5:80611000-80611800 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
44 chr5:80611000-80612000 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
45 chr5:80611000-80612000 Enhancers HSMMtube muscle
46 chr5:80611000-80612400 Enhancers HUES48 Cell Line embryonic stem cell
47 chr5:80611000-80612400 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
48 chr5:80611000-80612600 Weak transcription Fetal Muscle Trunk muscle
49 chr5:80611000-80612800 Weak transcription Primary monocytes fromperipheralblood blood
50 chr5:80611200-80611800 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow

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Last update: Aug 31, 2015