Variant report

Variant	rs73776510
Chromosome Location	chr6:134370265-134370266
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr6:134362111..134364725-chr6:134368474..134372362,3	K562	blood:
2	chr6:134367426..134370394-chr6:134371254..134373715,3	MCF-7	breast:

Extended variants
information (count: 5 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:4)

rs_ID	r²[population]
rs17063308	0.87[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17063315	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6916329	0.95[EUR][1000 genomes]
rs6941795	0.87[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv34122	chr6:134089019-134378252	Weak transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Active TSS Enhancers Flanking Active TSS Bivalent/Poised TSS Genic enhancers Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	12 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:43 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:134351600-134372400	Weak transcription	Right Ventricle	heart
2	chr6:134362800-134372800	Weak transcription	K562	blood
3	chr6:134362800-134373200	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
4	chr6:134363000-134372800	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
5	chr6:134363000-134372800	Weak transcription	NHEK	skin
6	chr6:134365400-134370600	Weak transcription	Fetal Intestine Small	intestine
7	chr6:134367200-134371800	Enhancers	Breast Myoepithelial Primary Cells	Breast
8	chr6:134368200-134371400	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
9	chr6:134368200-134373200	Weak transcription	Thymus	Thymus
10	chr6:134368600-134370600	Enhancers	Skeletal Muscle Male	skeletal muscle
11	chr6:134368800-134371000	Enhancers	Brain Cingulate Gyrus	brain
12	chr6:134369000-134372600	Weak transcription	Stomach Smooth Muscle	stomach
13	chr6:134369200-134371600	Weak transcription	Fetal Lung	lung
14	chr6:134369200-134372400	Weak transcription	HMEC	breast
15	chr6:134369200-134373000	Weak transcription	HSMMtube	muscle
16	chr6:134369200-134373200	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
17	chr6:134369200-134373200	Weak transcription	Lung	lung
18	chr6:134369400-134370400	Weak transcription	Right Atrium	heart
19	chr6:134369400-134372400	Weak transcription	Skeletal Muscle Female	skeletal muscle
20	chr6:134369600-134371800	Weak transcription	Aorta	Aorta
21	chr6:134369600-134372800	Weak transcription	Fetal Muscle Leg	muscle
22	chr6:134369800-134372400	Weak transcription	H1 Cell Line	embryonic stem cell
23	chr6:134370000-134370400	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
24	chr6:134370000-134370400	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
25	chr6:134370000-134370800	Enhancers	Brain Inferior Temporal Lobe	brain
26	chr6:134370000-134370800	Bivalent Enhancer	HepG2	liver
27	chr6:134370000-134371000	Enhancers	HUES64 Cell Line	embryonic stem cell
28	chr6:134370000-134371200	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
29	chr6:134370000-134371200	Enhancers	iPS-20b Cell Line	embryonic stem cell
30	chr6:134370000-134371200	Enhancers	NHLF	lung
31	chr6:134370000-134371800	Enhancers	Liver	Liver
32	chr6:134370000-134372400	Enhancers	Brain Anterior Caudate	brain
33	chr6:134370200-134370400	Enhancers	ES-I3 Cell Line	embryonic stem cell
34	chr6:134370200-134370400	Enhancers	HUES48 Cell Line	embryonic stem cell
35	chr6:134370200-134370400	Enhancers	Brain Angular Gyrus	brain
36	chr6:134370200-134370400	Enhancers	Brain Substantia Nigra	brain
37	chr6:134370200-134370600	Enhancers	Brain Dorsolateral Prefrontal Cortex	brain
38	chr6:134370200-134370600	Enhancers	Left Ventricle	heart
39	chr6:134370200-134370800	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
40	chr6:134370200-134370800	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
41	chr6:134370200-134371000	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
42	chr6:134370200-134372400	Enhancers	Brain Hippocampus Middle	brain
43	chr6:134370200-134372800	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung

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