The 2.0 version of rSNPBase

Variant report

Variant rs73781091
Chromosome Location chr5:115799755-115799756
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:80 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:115774600-115811000 Weak transcription Small Intestine intestine
2 chr5:115783600-115802200 Weak transcription Colonic Mucosa Colon
3 chr5:115783600-115802200 Weak transcription Pancreas Pancrea
4 chr5:115783600-115803400 Weak transcription Esophagus oesophagus
5 chr5:115783600-115813000 Weak transcription Spleen Spleen
6 chr5:115783600-115813200 Weak transcription Gastric stomach
7 chr5:115783600-115829600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
8 chr5:115783800-115803200 Weak transcription Liver Liver
9 chr5:115784200-115800000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
10 chr5:115785200-115800200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
11 chr5:115788000-115813200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
12 chr5:115789000-115800200 Weak transcription Psoas Muscle Psoas
13 chr5:115789600-115812600 Strong transcription Fetal Intestine Large intestine
14 chr5:115789800-115803200 Weak transcription Lung lung
15 chr5:115790000-115800200 Weak transcription Fetal Intestine Small intestine
16 chr5:115790400-115803200 Weak transcription Aorta Aorta
17 chr5:115790400-115812400 Weak transcription HepG2 liver
18 chr5:115790600-115800000 Weak transcription Skeletal Muscle Female skeletal muscle
19 chr5:115790800-115800000 Weak transcription Adipose Nuclei Adipose
20 chr5:115790800-115800200 Weak transcription Duodenum Smooth Muscle Duodenum
21 chr5:115790800-115802800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
22 chr5:115791000-115800000 Weak transcription Primary B cells from cord blood blood
23 chr5:115791000-115800200 Weak transcription Fetal Brain Female brain
24 chr5:115791000-115800200 Weak transcription Left Ventricle heart
25 chr5:115791000-115801600 Weak transcription Fetal Thymus thymus
26 chr5:115791000-115802200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
27 chr5:115791000-115802200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
28 chr5:115791000-115802800 Weak transcription Primary neutrophils fromperipheralblood blood
29 chr5:115791000-115804000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
30 chr5:115791000-115812400 Weak transcription Fetal Brain Male brain
31 chr5:115791000-115812600 Weak transcription Ovary ovary
32 chr5:115791400-115802200 Weak transcription Primary T cells from cord blood blood
33 chr5:115791400-115805400 Weak transcription HSMMtube muscle
34 chr5:115791600-115809600 Weak transcription Right Atrium heart
35 chr5:115791600-115838000 Weak transcription Right Ventricle heart
36 chr5:115791800-115800200 Weak transcription Fetal Stomach stomach
37 chr5:115792000-115805200 Weak transcription Primary hematopoietic stem cells blood
38 chr5:115792000-115809200 Weak transcription Colon Smooth Muscle Colon
39 chr5:115792400-115800000 Weak transcription Rectal Smooth Muscle rectum
40 chr5:115792600-115800400 Weak transcription Sigmoid Colon Sigmoid Colon
41 chr5:115792600-115801200 Weak transcription Fetal Lung lung
42 chr5:115792800-115802600 Weak transcription Fetal Kidney kidney
43 chr5:115792800-115812600 Weak transcription Pancreatic Islets Pancreatic Islet
44 chr5:115793800-115800000 Weak transcription Rectal Mucosa Donor 31 rectum
45 chr5:115795600-115799800 Weak transcription Brain Inferior Temporal Lobe brain
46 chr5:115795600-115800000 Weak transcription Skeletal Muscle Male skeletal muscle
47 chr5:115795600-115800200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
48 chr5:115795600-115800400 Weak transcription Duodenum Mucosa Duodenum
49 chr5:115796000-115833400 Strong transcription HUES64 Cell Line embryonic stem cell
50 chr5:115796600-115804400 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin

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Last update: Aug 31, 2015