Variant report

Variant	rs73789234
Chromosome Location	chr6:148969953-148969954
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 13 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:12)

rs_ID	r²[population]
rs17085359	1.00[AMR][1000 genomes]
rs17087769	1.00[AMR][1000 genomes]
rs56289985	1.00[AMR][1000 genomes]
rs61509163	1.00[AMR][1000 genomes]
rs73778904	1.00[AMR][1000 genomes]
rs73778905	1.00[AMR][1000 genomes]
rs73778910	1.00[AMR][1000 genomes]
rs73778914	1.00[AMR][1000 genomes]
rs73778916	1.00[AMR][1000 genomes]
rs73781501	1.00[AMR][1000 genomes]
rs73783205	1.00[AMR][1000 genomes]
rs73789246	1.00[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv5530	chr6:148954051-148998924	Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Active TSS	TF binding region Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:148966200-148973000	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
2	chr6:148967200-148973200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
3	chr6:148968800-148971600	Enhancers	Primary monocytes fromperipheralblood	blood
4	chr6:148968800-148971600	Enhancers	Primary B cells from peripheral blood	blood
5	chr6:148969200-148970400	Enhancers	Primary hematopoietic stem cells	blood
6	chr6:148969200-148971200	Enhancers	Primary hematopoietic stem cells short term culture	blood
7	chr6:148969200-148971400	Flanking Active TSS	Monocytes-CD14+_RO01746	blood
8	chr6:148969400-148970400	Enhancers	GM12878-XiMat	blood
9	chr6:148969400-148971000	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
10	chr6:148969400-148971400	Enhancers	Primary B cells from cord blood	blood
11	chr6:148969600-148970600	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
12	chr6:148969800-148970600	Weak transcription	Fetal Muscle Leg	muscle

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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