Variant report

Variant	rs73793896
Chromosome Location	chr5:145699893-145699894
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 14 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:13)

rs_ID	r²[population]
rs56393547	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs57605364	1.00[AMR][1000 genomes]
rs57650885	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs58281516	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs59545810	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6580412	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6886046	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73303448	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73303451	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73303481	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73317879	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73319927	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73793869	0.81[AFR][1000 genomes];1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1026614	chr5:145688621-145733216	Flanking Bivalent TSS/Enh Bivalent Enhancer Active TSS Bivalent/Poised TSS Flanking Active TSS Enhancers Weak transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:145699800-145700200	ZNF genes & repeats	Aorta	Aorta

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links