Variant report

Variant	rs73836715
Chromosome Location	chr4:95225497-95225498
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr4:95220854..95223011-chr4:95224417..95226717,2	K562	blood:
2	chr4:95225327..95226247-chr4:95311667..95312502,7	MCF-7	breast:
3	chr4:95225294..95226157-chr4:95516822..95517668,3	MCF-7	breast:
4	chr4:95211125..95211640-chr4:95225316..95226143,2	K562	blood:

Extended variants
information (count: 9 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:8)

rs_ID	r²[population]
rs57892926	1.00[AMR][1000 genomes]
rs58611152	1.00[AMR][1000 genomes]
rs73832548	1.00[AMR][1000 genomes]
rs73832564	1.00[AMR][1000 genomes]
rs73836714	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73836716	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73836719	1.00[AMR][1000 genomes]
rs73836720	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv993495	chr4:94992315-95482578	Weak transcription Genic enhancers Enhancers Transcr. at gene 5' and 3' Flanking Active TSS Strong transcription Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	29 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:22 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:95158200-95225800	Weak transcription	Stomach Mucosa	stomach
2	chr4:95185200-95226800	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
3	chr4:95208200-95227200	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
4	chr4:95208800-95227200	Weak transcription	Left Ventricle	heart
5	chr4:95210000-95228600	Weak transcription	Skeletal Muscle Female	skeletal muscle
6	chr4:95212800-95228800	Weak transcription	A549	lung
7	chr4:95214200-95226600	Weak transcription	Fetal Muscle Leg	muscle
8	chr4:95214200-95226800	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
9	chr4:95214200-95226800	Weak transcription	Osteobl	bone
10	chr4:95214200-95227600	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
11	chr4:95214400-95226400	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
12	chr4:95214400-95226400	Weak transcription	Duodenum Mucosa	Duodenum
13	chr4:95214400-95226800	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
14	chr4:95214400-95227000	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
15	chr4:95214400-95227600	Weak transcription	Primary hematopoietic stem cells short term culture	blood
16	chr4:95217200-95227600	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
17	chr4:95220600-95228600	Weak transcription	Primary hematopoietic stem cells	blood
18	chr4:95224800-95229200	Enhancers	HSMM	muscle
19	chr4:95225000-95226000	Weak transcription	Muscle Satellite Cultured Cells	--
20	chr4:95225000-95228200	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
21	chr4:95225200-95226400	Weak transcription	K562	blood
22	chr4:95225400-95227400	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived

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