Variant report

Variant	rs73836716
Chromosome Location	chr4:95227613-95227614
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 9 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:8)

rs_ID	r²[population]
rs57892926	1.00[AMR][1000 genomes]
rs58611152	1.00[AMR][1000 genomes]
rs73832548	1.00[AMR][1000 genomes]
rs73832564	1.00[AMR][1000 genomes]
rs73836714	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73836715	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73836719	1.00[AMR][1000 genomes]
rs73836720	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv993495	chr4:94992315-95482578	Weak transcription Genic enhancers Enhancers Transcr. at gene 5' and 3' Flanking Active TSS Strong transcription Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	29 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:22 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:95210000-95228600	Weak transcription	Skeletal Muscle Female	skeletal muscle
2	chr4:95212800-95228800	Weak transcription	A549	lung
3	chr4:95220600-95228600	Weak transcription	Primary hematopoietic stem cells	blood
4	chr4:95224800-95229200	Enhancers	HSMM	muscle
5	chr4:95225000-95228200	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
6	chr4:95226000-95229000	Enhancers	Muscle Satellite Cultured Cells	--
7	chr4:95226400-95228800	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
8	chr4:95226400-95228800	Enhancers	K562	blood
9	chr4:95226600-95229000	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
10	chr4:95226800-95229000	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
11	chr4:95226800-95229200	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
12	chr4:95227000-95229000	Enhancers	HUVEC	blood vessel
13	chr4:95227200-95228000	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
14	chr4:95227200-95228400	Weak transcription	Fetal Muscle Leg	muscle
15	chr4:95227200-95228400	Weak transcription	Osteobl	bone
16	chr4:95227200-95228800	Enhancers	Fetal Adrenal Gland	Adrenal Gland
17	chr4:95227400-95228400	Weak transcription	Right Atrium	heart
18	chr4:95227400-95229000	Enhancers	Cortex derived primary cultured neurospheres	brain
19	chr4:95227400-95229000	Enhancers	HSMMtube	muscle
20	chr4:95227600-95227800	Enhancers	Primary hematopoietic stem cells short term culture	blood
21	chr4:95227600-95227800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
22	chr4:95227600-95229000	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived

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