The 2.0 version of rSNPBase

Variant report

Variant rs73837051
Chromosome Location chr3:52377465-52377466
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:83 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:52330400-52378600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
2 chr3:52344600-52378600 Weak transcription Primary hematopoietic stem cells short term culture blood
3 chr3:52352000-52379800 Weak transcription Duodenum Smooth Muscle Duodenum
4 chr3:52352200-52379000 Weak transcription Colonic Mucosa Colon
5 chr3:52352200-52382000 Weak transcription Rectal Mucosa Donor 31 rectum
6 chr3:52352200-52384600 Weak transcription Primary T killer naive cells fromperipheralblood blood
7 chr3:52352600-52379400 Weak transcription Pancreas Pancrea
8 chr3:52354400-52379800 Weak transcription Esophagus oesophagus
9 chr3:52354800-52384000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
10 chr3:52358400-52380400 Weak transcription Ovary ovary
11 chr3:52362400-52378200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
12 chr3:52362800-52378600 Weak transcription Brain Cingulate Gyrus brain
13 chr3:52364200-52383000 Weak transcription Fetal Lung lung
14 chr3:52364400-52379400 Weak transcription Cortex derived primary cultured neurospheres brain
15 chr3:52364800-52394400 Weak transcription HSMMtube muscle
16 chr3:52366400-52378400 Weak transcription Brain Anterior Caudate brain
17 chr3:52366400-52383000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
18 chr3:52366600-52377800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
19 chr3:52366600-52377800 Weak transcription Spleen Spleen
20 chr3:52366600-52378400 Weak transcription Gastric stomach
21 chr3:52366600-52379400 Weak transcription Stomach Smooth Muscle stomach
22 chr3:52366600-52386600 Weak transcription Aorta Aorta
23 chr3:52366800-52383000 Weak transcription Rectal Smooth Muscle rectum
24 chr3:52367200-52378600 Weak transcription Sigmoid Colon Sigmoid Colon
25 chr3:52367200-52379600 Weak transcription Skeletal Muscle Male skeletal muscle
26 chr3:52367600-52384400 Weak transcription Fetal Kidney kidney
27 chr3:52368400-52378400 Weak transcription Breast Myoepithelial Primary Cells Breast
28 chr3:52368400-52378400 Weak transcription Skeletal Muscle Female skeletal muscle
29 chr3:52368400-52378600 Weak transcription Primary B cells from peripheral blood blood
30 chr3:52368400-52383000 Weak transcription Primary T killer memory cells from peripheral blood blood
31 chr3:52368800-52377600 Weak transcription Fetal Adrenal Gland Adrenal Gland
32 chr3:52368800-52378200 Weak transcription Primary T helper cells PMA-I stimulated --
33 chr3:52368800-52378200 Weak transcription Fetal Muscle Trunk muscle
34 chr3:52368800-52378400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
35 chr3:52368800-52380200 Weak transcription Left Ventricle heart
36 chr3:52368800-52380400 Weak transcription Placenta Placenta
37 chr3:52368800-52380400 Weak transcription Rectal Mucosa Donor 29 rectum
38 chr3:52370600-52379600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
39 chr3:52372000-52379200 Weak transcription Primary B cells from cord blood blood
40 chr3:52372000-52379600 Weak transcription NHLF lung
41 chr3:52372000-52380400 Weak transcription Primary hematopoietic stem cells blood
42 chr3:52372200-52379600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
43 chr3:52372400-52378600 Weak transcription Primary T helper cells fromperipheralblood blood
44 chr3:52372600-52379600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
45 chr3:52372600-52379600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
46 chr3:52373800-52396000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
47 chr3:52374000-52377600 Weak transcription Primary T helper naive cells fromperipheralblood blood
48 chr3:52374000-52378400 Weak transcription Brain Substantia Nigra brain
49 chr3:52374000-52378600 Weak transcription Brain Angular Gyrus brain
50 chr3:52374000-52378600 Weak transcription Brain Hippocampus Middle brain

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Last update: Aug 31, 2015