The 2.0 version of rSNPBase

Variant report

Variant rs73840205
Chromosome Location chr3:53124910-53124911
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:53107600-53133600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
2 chr3:53107800-53126000 Weak transcription Primary T killer naive cells fromperipheralblood blood
3 chr3:53107800-53134000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
4 chr3:53107800-53151400 Weak transcription iPS-15b Cell Line embryonic stem cell
5 chr3:53117600-53130800 Strong transcription Primary mononuclear cells fromperipheralblood Blood
6 chr3:53117800-53147200 Weak transcription Psoas Muscle Psoas
7 chr3:53118000-53125200 Weak transcription Colon Smooth Muscle Colon
8 chr3:53118000-53125400 Strong transcription Monocytes-CD14+_RO01746 blood
9 chr3:53118200-53129800 Weak transcription Fetal Brain Male brain
10 chr3:53118400-53125200 Strong transcription Primary monocytes fromperipheralblood blood
11 chr3:53118600-53135200 Weak transcription NH-A brain
12 chr3:53118800-53125000 Weak transcription NHLF lung
13 chr3:53118800-53125800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
14 chr3:53118800-53132000 Weak transcription HSMM muscle
15 chr3:53118800-53135200 Strong transcription Fetal Thymus thymus
16 chr3:53119000-53125000 Weak transcription NHDF-Ad bronchial
17 chr3:53119000-53128000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
18 chr3:53119000-53135000 Weak transcription K562 blood
19 chr3:53119000-53154200 Weak transcription Stomach Mucosa stomach
20 chr3:53119200-53133800 Strong transcription Fetal Stomach stomach
21 chr3:53119600-53125800 Weak transcription Primary T helper naive cells from peripheral blood blood
22 chr3:53119600-53136000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
23 chr3:53120400-53132000 Weak transcription Hela-S3 cervix
24 chr3:53120400-53138600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
25 chr3:53120600-53134600 Strong transcription Primary T helper cells fromperipheralblood blood
26 chr3:53120800-53126600 Strong transcription Fetal Adrenal Gland Adrenal Gland
27 chr3:53120800-53128400 Strong transcription Gastric stomach
28 chr3:53120800-53138400 Strong transcription Primary hematopoietic stem cells short term culture blood
29 chr3:53120800-53144400 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
30 chr3:53121200-53130200 Strong transcription Primary B cells from peripheral blood blood
31 chr3:53121200-53130200 Strong transcription Primary Natural Killer cells fromperipheralblood blood
32 chr3:53121200-53134200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
33 chr3:53121400-53128200 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
34 chr3:53121400-53128400 Strong transcription Spleen Spleen
35 chr3:53121400-53130600 Strong transcription Primary T regulatory cells fromperipheralblood blood
36 chr3:53121400-53142600 Strong transcription Stomach Smooth Muscle stomach
37 chr3:53121600-53129000 Strong transcription Primary B cells from cord blood blood
38 chr3:53121800-53135400 Strong transcription Primary T cells from cord blood blood
39 chr3:53121800-53137800 Strong transcription Fetal Muscle Trunk muscle
40 chr3:53122200-53130200 Strong transcription Primary T helper naive cells fromperipheralblood blood
41 chr3:53122200-53132800 Weak transcription HUVEC blood vessel
42 chr3:53122200-53133200 Weak transcription A549 lung
43 chr3:53122400-53136800 Weak transcription ES-I3 Cell Line embryonic stem cell
44 chr3:53122400-53143200 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
45 chr3:53122600-53125200 Weak transcription H9 Cell Line embryonic stem cell
46 chr3:53122800-53152200 Weak transcription Small Intestine intestine
47 chr3:53123000-53128200 Strong transcription Aorta Aorta
48 chr3:53123000-53129600 Strong transcription Placenta Placenta
49 chr3:53123000-53133000 Weak transcription Fetal Kidney kidney
50 chr3:53123200-53125000 Weak transcription iPS-18 Cell Line embryonic stem cell

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Last update: Aug 31, 2015