Variant report

Variant	rs73841916
Chromosome Location	chr3:82131063-82131064
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 5 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:1)

rs_ID	r²[population]
rs72901640	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1007167	chr3:82050178-82301466	Weak transcription Enhancers Active TSS Flanking Active TSS ZNF genes & repeats Bivalent Enhancer	Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
2	nsv877041	chr3:82074024-82363196	Enhancers Active TSS Weak transcription Flanking Active TSS ZNF genes & repeats Bivalent Enhancer	Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
3	nsv1008429	chr3:82089650-82510536	Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases
4	nsv432460	chr3:82107110-82508010	Weak transcription Enhancers Flanking Active TSS Active TSS ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:24 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:82128000-82131200	Enhancers	HUVEC	blood vessel
2	chr3:82129400-82131200	Enhancers	HMEC	breast
3	chr3:82129400-82132400	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
4	chr3:82130000-82132000	Weak transcription	Primary B cells from cord blood	blood
5	chr3:82130000-82133200	Weak transcription	HUES64 Cell Line	embryonic stem cell
6	chr3:82130200-82132800	Enhancers	Dnd41	blood
7	chr3:82130200-82133400	Weak transcription	HUES48 Cell Line	embryonic stem cell
8	chr3:82130200-82133600	Weak transcription	ES-I3 Cell Line	embryonic stem cell
9	chr3:82130200-82133600	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
10	chr3:82130200-82133600	Weak transcription	iPS-20b Cell Line	embryonic stem cell
11	chr3:82130200-82134000	Weak transcription	Brain Hippocampus Middle	brain
12	chr3:82130200-82134400	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
13	chr3:82130200-82134600	Weak transcription	HSMMtube	muscle
14	chr3:82130400-82133000	Weak transcription	Cortex derived primary cultured neurospheres	brain
15	chr3:82130600-82131800	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
16	chr3:82130600-82132000	Weak transcription	NH-A	brain
17	chr3:82130800-82131800	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
18	chr3:82130800-82132000	Weak transcription	HSMM	muscle
19	chr3:82130800-82132200	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
20	chr3:82130800-82133600	Weak transcription	Breast Myoepithelial Primary Cells	Breast
21	chr3:82130800-82136800	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
22	chr3:82130800-82136800	Weak transcription	NHEK	skin
23	chr3:82131000-82131400	Weak transcription	Muscle Satellite Cultured Cells	--
24	chr3:82131000-82132000	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived

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