Variant report

Variant	rs73862264
Chromosome Location	chr4:152730238-152730239
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 8 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:7)

rs_ID	r²[population]
rs58776263	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs60850965	1.00[AMR][1000 genomes]
rs72962977	1.00[AMR][1000 genomes]
rs72962990	1.00[AMR][1000 genomes]
rs72966815	1.00[AMR][1000 genomes]
rs73862074	1.00[AMR][1000 genomes]
rs73862267	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv432644	chr4:152635395-153023402	Enhancers Flanking Active TSS Weak transcription ZNF genes & repeats Strong transcription Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	23 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:13 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:152721200-152731400	Weak transcription	H9 Cell Line	embryonic stem cell
2	chr4:152726000-152731800	Enhancers	Fetal Heart	heart
3	chr4:152726200-152731200	Weak transcription	iPS-18 Cell Line	embryonic stem cell
4	chr4:152726400-152732000	Weak transcription	HUES64 Cell Line	embryonic stem cell
5	chr4:152728200-152732000	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
6	chr4:152728200-152732000	Weak transcription	HUES48 Cell Line	embryonic stem cell
7	chr4:152729400-152730600	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
8	chr4:152729400-152731800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
9	chr4:152729400-152732600	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
10	chr4:152729600-152739400	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
11	chr4:152730000-152732200	Weak transcription	Right Atrium	heart
12	chr4:152730200-152731600	Weak transcription	HUES6 Cell Line	embryonic stem cell
13	chr4:152730200-152731800	Weak transcription	H1 Cell Line	embryonic stem cell

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links